Gene Patl_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0351 
Symbol 
ID4173174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp407972 
End bp408724 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID638053350 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_659936 
Protein GI162382313 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAG AGCGTTATCA GCGCATTCGT AAGTTATTAA GTACCCGCCA GCCATCCTTA 
ACGGTTTGTT TAGAACAAGT TCATAAACCA CACAATGTAT CTGCTGTTTT GCGCAGCTGT
GACGCAGTGG GGATCAACCG TATTCATGGC GTATGGGATC AAAAAACCAA GATACGCAAA
GGCACCGCTA TGGGGTCAGA GCATTGGGTT AAAACCGAGA TGCACACCAG TATTGGCGAT
GCTGTCAGCG TGTTAAAACA ACAAAACATG CAAGTGTTGG TCACTCATTT ATCTGATGAT
TCAGTGGATT TCAGGGACAT AGACTACACC CAGCCCACGG CCATTATTCT TGGCCAAGAG
AAGCACGGTG CTACCGAAGA AGCGATTGCC GTAGCTGACA AAAACATCGT CATTCCCATG
GTCGGTATGG TGCAGTCATT GAACGTTTCG GTGGCTGCTG CTGTGGTGTT ATACGAAGCT
CAGCGTCAGC GAGAAGTGGC TGGTATGTAC AACAGCCTTC AACTGAGCGA AGAAGAGTGT
CAGCGTGTTC TATTTGAAGG CGGATTTCCT GTATTATCAA ACGTGTGTCG AAACAAAGGC
CTCGATTACC CACATATTGA TGAAGGCGGT AACATAGTGG CTGATGCAAG CTGGTGGCAG
AAAATGCAAA CCACCGCAAA AGCGATGCGC CAACTAGAAC AAGAAGCCAT TAGCGAGATA
GAATACGAGA AAAGCCATAG AGGTAATCGT TAA
 
Protein sequence
MSVERYQRIR KLLSTRQPSL TVCLEQVHKP HNVSAVLRSC DAVGINRIHG VWDQKTKIRK 
GTAMGSEHWV KTEMHTSIGD AVSVLKQQNM QVLVTHLSDD SVDFRDIDYT QPTAIILGQE
KHGATEEAIA VADKNIVIPM VGMVQSLNVS VAAAVVLYEA QRQREVAGMY NSLQLSEEEC
QRVLFEGGFP VLSNVCRNKG LDYPHIDEGG NIVADASWWQ KMQTTAKAMR QLEQEAISEI
EYEKSHRGNR