Gene Patl_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0344 
Symbol 
ID4173167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp402259 
End bp402738 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID638053343 
ProductYHS domain-containing protein 
Protein accessionYP_659929 
Protein GI109896674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA ATCCCTTTGT CATTGCCCAC CGCACAGCGA AGATTACCGT CCTCTTCATC 
ATGCTTAGTG TTAGTCATTT TGCCTTTGCA CAAGACCCCA TCGAAACAGG CTTTTTTAAT
AATAAAGCAA TTTACGGTTA CGATACGGTC GCTTACTTCA CTTCGAATAA AGCAGTAAAA
GGCGACGGTG CATTTACCAC ACAGTGGCGC GGAGCCGACT GGTTTTTTAG CTCGCAAGCA
CATTTAGATT TATTTAAAAA TGAACCTGAA AAATACGCCC CGCAATACGG TGGTTACTGC
GCCTATGCGA TGGCCACGGG TGATTTTGTT GGGATAGATG AAGACGCTTT CGTTATTGAT
AATGGTAAGC TTTACTTAAA CTACAGTGCC AGCGTGCAAC AAAAATGGCT GGCGAATAAA
GCCCAATATA TTGAGCAAGC CGATGCCCAG TACCTTATGC AATACCCCGC AAGCAAGTAA
 
Protein sequence
MTINPFVIAH RTAKITVLFI MLSVSHFAFA QDPIETGFFN NKAIYGYDTV AYFTSNKAVK 
GDGAFTTQWR GADWFFSSQA HLDLFKNEPE KYAPQYGGYC AYAMATGDFV GIDEDAFVID
NGKLYLNYSA SVQQKWLANK AQYIEQADAQ YLMQYPASK