| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0339 |
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| Symbol | |
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| ID | 4173162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 397355 |
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| End bp | 398536 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053338 |
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| Product | HemY-like |
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| Protein accession | YP_659924 |
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| Protein GI | 109896669 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | [TIGR00540] hemY protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAA TTTTAATGGT CTTCGTGGCC TTGCTTATTG CCGTGTTGGT TGGCTCTTTA
ATATTCGACG ACAAGGGCTA TGTATTTATT GATTTCGCTG GCTACGTTGT TGAAATGAAC
GTGTTTTCCA TGGCGATAAT GACGATCCTG GTTATCGTAG GTTTGCTACT TTTTTCATGG
TTAATCAAAA AGTTAATCAT GATCATCTCA GGCTCAAAAA ACTGGCTAGG CAACTGGGGT
TCACGTAAAA AGAAACGCGC ATTCACCAAT GGACTTATCG CATTGGCCGA GCAAAACTTC
CTTGAAGCTC GCAAGCAACT TGCCAGTATC GAGCAAGAAG ATTTCGATGG CTTAAACTTG
CTTGCTGCCG CCGAAGCAGA GCTACAACTG CAAAACCCAG CAGGTGCGCA AGAATACTGG
CGCTTAGCCA CGTCTTACCC TAAGTCAGCC TTTGCTGCCC GGTTATGTCT GGTACGCGAT
CACTTGCAAA ATCAGCACCC AGTCAAAGCC CTCGACATTT TGGATGAGCT CGACGACAAA
CAAAAACGCC AACGTTCAGT CCTGACTCTG CGAGCACAAG CATTGGTTCA AGCGGGTAAA
TGGCAAGAAT TAAAAGACCG CTTACCCTCT TGGAAAAAAG CCCTAGGCGA ACATTACGAA
CACTATATGC AGTTAGCATC AAAAGGTAAC TTTGCCGAAA TCGCCAGTAA AGAGGGGGCA
AACCAGCTGA AAGAAAATTG GCATTCACTG CCTAAGTCGA CAAGACGCGA CCCTGCTTTA
CAAGCAGCGT ACGTTAAGCA GCTCATTGAC CAAGGTATGC ATATCGATGC CGAAGCAGCA
CTGGGCGAGT ATCATAAAAA CAAACCCCAT CCTATGTTGT TACCTCTTTA TAAAGAGTTA
AAACTGTCTC AGCCAACCAC GTCGCTGAAA CAGCTAGAAC AATGGTTAAA AGCAGACGAC
ATGAATGTCG AGCTACTCTC GACCTTAGGT GCAGTTGCCT ATAACGCCAA GGATTTTAGT
TTGGCCGAAA AAGCCTTAAG CAAAGCCATT AAGCTGGGTA ATCGTCAGCA AGACATATTG
CTGTTAGCAA AGATAAAAGA ATCGCAACAA GACAATCAGC AAGCCTTGGC TCTTTACAAA
CAAAGCTTGG CCCAACCCAA TGAACTGACT AAAGCGGAAT AA
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| Protein sequence | MIRILMVFVA LLIAVLVGSL IFDDKGYVFI DFAGYVVEMN VFSMAIMTIL VIVGLLLFSW
LIKKLIMIIS GSKNWLGNWG SRKKKRAFTN GLIALAEQNF LEARKQLASI EQEDFDGLNL
LAAAEAELQL QNPAGAQEYW RLATSYPKSA FAARLCLVRD HLQNQHPVKA LDILDELDDK
QKRQRSVLTL RAQALVQAGK WQELKDRLPS WKKALGEHYE HYMQLASKGN FAEIASKEGA
NQLKENWHSL PKSTRRDPAL QAAYVKQLID QGMHIDAEAA LGEYHKNKPH PMLLPLYKEL
KLSQPTTSLK QLEQWLKADD MNVELLSTLG AVAYNAKDFS LAEKALSKAI KLGNRQQDIL
LLAKIKESQQ DNQQALALYK QSLAQPNELT KAE
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