| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0337 |
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| Symbol | |
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| ID | 4173160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 395040 |
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| End bp | 396245 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053336 |
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| Product | ROK domain-containing protein |
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| Protein accession | YP_659922 |
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| Protein GI | 109896667 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCTTTC AAATAGGCTA TAGCAATTTT AAGGTAGATG TATTACTTAT GTTCTCAATC
GACAACAGTC AATATTTGCG TTCTGGTTTT AAACTCGGAA AAGGCAGTAA GCTTTTCCAA
GATATTGAGC GCGATATTAT CAAAATTGTC TTTTGGGAAC AGCGTGTCAC CCAGAGCCAA
TTGGTGTCTG CCACCAAAAT TCCTCAGCAA ACCGTATCCC GCTTATTAAA AGGCCTGACC
CAATCAAAGG TGCTGCGTCA AACCGAAGAG ATGATCCCTA ATCCTAAAGG TAAACCGGGT
TTTGGCATTG AGCTAAACCC TGACTATGCC TGCACCTTTG GCGTATCGAT ATTATTAGAT
GCTGTTGGTG TGGCGGTGAT GGACTTTGCC GGCAATGTCA TGGCCACAGA GTTCCGCGAA
ATGGACGACA TGAGCATTGC ACATGTGCTT GAGGCGACGG AACAACTTAT CGCTGAACTA
AGTGCGCGCT GTAAACTCGA TGAGTCGCGC GTACTAGGAA TTGGGGTTGG AATTTCAGGT
TTCTTTAGCT CCATGGATGG CAAAATGAAC ACCCACCATA TGCTTGAAGA ATGGTCACAA
GTGGATATTG TGCAGATTAT CTCAAGTCAC TTTACATTGC CTACTTGGGT GGTGAATGAC
GGCACAGGCG CGGCCGCAGG TGAGGGTGTA GCGGGCGTGG GTCGCCAATA TAAGAACTTT
GTTTACTTAT TTGTTTCATC AGCTTTTGGT GGCGGCGTTG TGACCAACAC GGAGGTGCTG
CGAGGCACCT ATGGTAATGC CGGTGAGTTG GGCGATATGT TGCCATCAAA AATTTACGCT
CATCCCAATT TAGAATTACT GAAGCGGATC TTGAAGAAAA ATGGTGTGAA ATTCAGCTCC
ATTTATAACT TGCATGAAGA GTTTGATCCG AACTGGCCAG GTGTAGAAGA ATGGATTTTC
AAGGTGCAAG ATTCGTTTGA TTTAGTCGCC ACCTGTTGCT CTGCTTTATT GGATGCAGAA
GCGATTATCA TCGGCGGGCA TATCCCTAAA GAGTTGGCTG AAATGGTCAT TCCGCGTATC
GACGTGTATG CACAATTTCG CCGAGGTGCG AAGCGCCCGA TGCCTAAAAT TGTGGTATCG
GGCATAGAGA AGCACCCTGT TTCAATTGGT GCAGCAACCA TTCCCTTGCG CGAGCTCTGC
TTGTAG
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| Protein sequence | MSFQIGYSNF KVDVLLMFSI DNSQYLRSGF KLGKGSKLFQ DIERDIIKIV FWEQRVTQSQ
LVSATKIPQQ TVSRLLKGLT QSKVLRQTEE MIPNPKGKPG FGIELNPDYA CTFGVSILLD
AVGVAVMDFA GNVMATEFRE MDDMSIAHVL EATEQLIAEL SARCKLDESR VLGIGVGISG
FFSSMDGKMN THHMLEEWSQ VDIVQIISSH FTLPTWVVND GTGAAAGEGV AGVGRQYKNF
VYLFVSSAFG GGVVTNTEVL RGTYGNAGEL GDMLPSKIYA HPNLELLKRI LKKNGVKFSS
IYNLHEEFDP NWPGVEEWIF KVQDSFDLVA TCCSALLDAE AIIIGGHIPK ELAEMVIPRI
DVYAQFRRGA KRPMPKIVVS GIEKHPVSIG AATIPLRELC L
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