| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0334 |
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| Symbol | |
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| ID | 4173157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 389502 |
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| End bp | 391949 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053333 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_659919 |
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| Protein GI | 109896664 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000617894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA CACCTATTGC CTGTGCAGTT TCGATACTTT TTGCCACCCC ATTAATGGCC
CAAGAAGCAA ATACGGAAAC CCCTGACAAT GATGAGTATG AAAATATTAT TGTTACCGGT
TCTAGTGTTG CACGTACTGA AGCAGACACC CCAGCCAAAA CGACCTTGAT TGGTAAAGAC
CAAATCGCCA ACACAGGGTT TTCGAGTCAA GCTGACATAC TCATGAGTGT TCCCGGTATT
AAAGTAGAGG GGGGCGGGGG TGAAGTCGCA ACCAACGCAT TCGTTCGTGG TTTACCTTCT
GGTGGTCAAT TTCAGTTTAC TCCCCTTAAT TACGACGGCA TGCCGGCATT CCAATCTGGC
ATGACATCGT CAGCACAAGA TGTTTACTAC CGTCCTGACA TCGGCATAGA AAGAGTCGAG
TACGTGGGTG GTGGTGTGTC TAACTTGTTT GGCCCAGGTT CAGTGGCCGG CATTATCAAC
TATATTTCGC GTACGGGCAG TGACGATCCA GAAACCACAG TGCAGGTCGA AATCGCCGAA
GAAGGCCGAG TTAGAACAGA CTTCTATAAT AGCGGCGCGT TATCCAGTGA TGAAAACTTG
TATTACGCGA TCTCTGGTTT CTATCGTTAC GATGAAGGCC CGTTAGAAAC AGGCTTAGAA
ACCAAGGGTT ACCAGCTTAG AGGTAACATT CGTAAAGAAT TCGACGATGG CCATATTACC
TTCCACGGTC AAATGATTGA TGACCAAGTG CAGTTTTTCC TTCCTTTACC CCTTGAAGGT
GACAGCCGCG AGCGTTTAAC CGGTAATGAT GGCGAAACCG TCTATGTGGC ACAAACCGTT
GCCGCAGCCG ATTTACGTTA CGACACAGCC GATGGCACCT ATGAATCACC TATTCGAAAT
GGTGTGCTCA CAGAGGGTGG TTCATTCGGT GTTGATTTTG AGAAAGAGTT AACTGACAAC
TGGCGCTTAG CGGGTAAGGC AAAAGTCGCC AGCTATGACC ACCAGTTCAA CCTATTCTTG
GATGGCGACG GCATTGCCAA CACGCCAGAG ACGCAAGAAG GTTACGCGAA TAACCTAGGT
CGCACCGCAA ACGGTGACGT TTTAAGCTCA CTAGGCAGCG CTAACTATAC ATGGTCTGAA
ACCGGCAATG CGTTACCAGA AGATTACTTG TTATTCGGTA ACCGCTTATT AGATCGCCAG
CGCGACGGTG ATTTCTTCAG TACTGAATTC AACTTAACAG GTGACATAGA GGCAGGCGGA
TTCGACCATA CCGTGAATAT CGGTACCTTC TTCATCAACT CATCGCAGAT GGATTACAAC
ATTATCTCCA GCTATTTAGC CGATTTTAGC AATGGCGACA GCGCGCGCTT GGTTGACTTG
TCTTTCACCA ATGAAGCGGG TGATACAGTG CAATATTCGA AAAACGGTAT TGTCGGGCCA
GGCACAAGTT ACACCAATAA AGATTTAACC AGTAAGCGTA TGGCGTTTTA CGTAACGGAC
CAGATGGAAA ATGACCAATG GGCACTCGAC GTCGGTATGC GTGTTGAACG TGCTGAAGGG
ACAACTAAAT CTGAAGGCAG TGAAGTGGTT GTGGTAAATG ACGACCCATC ATTAGCACCG
AACTTACAAG TTAACACCAC AGGTAACGGG CGTTTTACTT ACGGTGAAGT GGCTACAACC
GAAGCGGCAT TCTCGGCGGC TGTGTTGTAC AAAATGGATG ATCAAGACCT GAACCTATAC
GCGAATGCGT CAACCGGTTA TTTCTTCCCG CAAATCAGAA GTATCACGTT TAACGAAAAC
GGTGAGCCAC AAAGCTACGA GGGCGAAGAT ATTACCCTGG GCGCGATTGG TTTTAAGTAT
TTCCCAGAAG ATTTATACAT AGATGCGTCA TTGTTCATAG CGAACTTGGA TAATCGCCGT
TCAGTGGACT TCGAAAATGA TGGCTCAGGC GGATTACTAG AAGTGGTGAA GCAGCAATCA
ACGGAAACCA CAGGCGCTGA AGTGATTACT CGCTGGAATA TGACAGACGA AGTGATCCTT
GAAGGTAACG TGACCTATCA AGACGCTGAA TTTAGCGAAG GCGGTAACGT AGGTAAGCAA
CCAAGAAGAC AGCCTGAGTT CTCGGGTAAT CTTGCGGTTT CTTATAACAA TGGCTTTGTT
GATGCGCGCT TAGGTTTGAG TTACTTCGGT GATGCTTACG CGAACGACGA TAACTCAGTC
GAACTGGATA GCCACACTAT TGCGACCTTA AGTGCCGGTT ATTCTTGGGA GCTAAATAAC
GATCAGCAAA TTCGTGTCGG CGTCAGTGTG TGGAACTTGT TCGACACTGA CGGCATTACC
GAAGGCTCAC CTCGTCAAGG TAACAGCCAA GTGTCGGGTG GCGAGTTCTT CGTGGGCCGC
CCAGTGCTAC CACGCAGAGT GAGCTTAACA GCACGATATG ATTTCTAA
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| Protein sequence | MKMTPIACAV SILFATPLMA QEANTETPDN DEYENIIVTG SSVARTEADT PAKTTLIGKD
QIANTGFSSQ ADILMSVPGI KVEGGGGEVA TNAFVRGLPS GGQFQFTPLN YDGMPAFQSG
MTSSAQDVYY RPDIGIERVE YVGGGVSNLF GPGSVAGIIN YISRTGSDDP ETTVQVEIAE
EGRVRTDFYN SGALSSDENL YYAISGFYRY DEGPLETGLE TKGYQLRGNI RKEFDDGHIT
FHGQMIDDQV QFFLPLPLEG DSRERLTGND GETVYVAQTV AAADLRYDTA DGTYESPIRN
GVLTEGGSFG VDFEKELTDN WRLAGKAKVA SYDHQFNLFL DGDGIANTPE TQEGYANNLG
RTANGDVLSS LGSANYTWSE TGNALPEDYL LFGNRLLDRQ RDGDFFSTEF NLTGDIEAGG
FDHTVNIGTF FINSSQMDYN IISSYLADFS NGDSARLVDL SFTNEAGDTV QYSKNGIVGP
GTSYTNKDLT SKRMAFYVTD QMENDQWALD VGMRVERAEG TTKSEGSEVV VVNDDPSLAP
NLQVNTTGNG RFTYGEVATT EAAFSAAVLY KMDDQDLNLY ANASTGYFFP QIRSITFNEN
GEPQSYEGED ITLGAIGFKY FPEDLYIDAS LFIANLDNRR SVDFENDGSG GLLEVVKQQS
TETTGAEVIT RWNMTDEVIL EGNVTYQDAE FSEGGNVGKQ PRRQPEFSGN LAVSYNNGFV
DARLGLSYFG DAYANDDNSV ELDSHTIATL SAGYSWELNN DQQIRVGVSV WNLFDTDGIT
EGSPRQGNSQ VSGGEFFVGR PVLPRRVSLT ARYDF
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