Gene Patl_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0325 
Symbol 
ID4173147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp380844 
End bp381410 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content41% 
IMG OID638053323 
Producthypothetical protein 
Protein accessionYP_659910 
Protein GI109896655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.606726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGTT ATACGCGATT TATTTTTGCC AGCAATCATG ATCAAGTTTT AAAAGCGGGG 
GGAAGGGAGC GACGCTTCCT TGTCCTTGAA CCATCTGCTA AATATGCACA GCACAAAGAG 
TATTTTGATA ATTTGTGGAA GTGGATTAAT GAAGGAGGGG CTAATTGTCT GCTTCATTAT 
TTGTCGCAAT ACGATTTAAA CGGCTTTGAC TCTAGAAGAG CTCCGGTTAC ACAAGCACTA 
CTAGACGAAA AACTTCAAAA CCTTTCACCT TACCAACAAT TCTTTCGCGC TGAGTTAAGC 
AATGACCGTC CATTTGGCGG CGCTGTTAGG CTAAGCACAA AAGATTTAGT AAATAATTGT 
CGTATATGGC TAGAAGATAA TGGTTATCCG GTTGTAATAC CCAAAGTGCG CAGTTCTATC 
GGTAAGCTGG TTCAGCGGAT GGGAATCGAT AGGCATGGTA AACATGGACG TGATGCTATG 
TATGAGTTTC CATCACGTTC TGAAATGCAG ACCAGTTTTG CAAGGCTATT GGGTCATGAA 
AAAGATGAAA TTTTCAATTC CGATTAG
 
Protein sequence
MPSYTRFIFA SNHDQVLKAG GRERRFLVLE PSAKYAQHKE YFDNLWKWIN EGGANCLLHY 
LSQYDLNGFD SRRAPVTQAL LDEKLQNLSP YQQFFRAELS NDRPFGGAVR LSTKDLVNNC 
RIWLEDNGYP VVIPKVRSSI GKLVQRMGID RHGKHGRDAM YEFPSRSEMQ TSFARLLGHE 
KDEIFNSD