| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0316 |
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| Symbol | |
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| ID | 4172910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 366862 |
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| End bp | 367824 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638053315 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_659902 |
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| Protein GI | 109896647 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATAC CCGCCTTATT TAACAATAAA CTGAGCTTAC CCGTGATTTG CGCGCCGATG
TTCTTGGTGT CTAGCCCGAA GCTCGTTATC AGTGCCTGCA AAAATGGCAT AGTGGGGTCG
TTCCCCACCT TTAATACACG AACCCAAGAT TTGCTTGATA CATGGCTCAC GCAGATCAGC
AGTGAACTTG CCGAATATGC CGCGGCAAAC CCCCAAAAGC CTGTTGCACC TTTTGCGGTT
AATTTAGTCG TGCACCCCTC AAATACGCGG TTAGAAAGTG ATCGCGCGGT GGTTAAGAAG
CACCAAGTGC CTTTTGTGAT CACCAGTCAA GGTAACCCCG CAGACGTCGT TGCAGAGGTT
CACCAATGGG GCGGCTTGGT TTTCCATGAT GTTATTCGCG CTGACCATGC CAAAAAAGCC
ATTCAGGCCG GTGTTGACGG CATCATCATA GTCACCGCTG GCGCGGGTGG CCATGCCGGA
GAAATAAACC CATTTGCCTT GGTGCGAGAG ATCCGTGAAT TTTGGAATGG GCCACTAGCG
CTTGCCGGGG CAATCAATGA CGGCATGGGA GTGCGCGCTG CCGAAATTCT CGGGGCTGAT
TTTAGCTATA TGGGCACCCG CTTTATCGCC ACAGAAGAGG CAGAAGTAGA CCCAGATTAT
AAGTCCATGC TGGTGGACTC ACAGATAAGC GATCTTATCT ACACCGATAC CTTCACCGGG
GTTAAGTGTA ACTTTTTAAA ACCCTCTATC GCTCGCGCAG GGGTCGATTT AGCCAACTTT
ACCGCCAAAA CTCATGTGGA CTTAGATCTA GGCGAAAGCA ACGCGTGGAA AGATTTTTGG
AGCGCAGGGC ACGGTATAGC AGGTATCAAG CACGTGTTGC CTATGGCTGA GTTAGTTGAG
CAGCTCAAAG AAGAGTATCG CGGCGCAGTA GCGCACCCAG CGTTCTTAAA TAATCAAGTC
TAA
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| Protein sequence | MAIPALFNNK LSLPVICAPM FLVSSPKLVI SACKNGIVGS FPTFNTRTQD LLDTWLTQIS
SELAEYAAAN PQKPVAPFAV NLVVHPSNTR LESDRAVVKK HQVPFVITSQ GNPADVVAEV
HQWGGLVFHD VIRADHAKKA IQAGVDGIII VTAGAGGHAG EINPFALVRE IREFWNGPLA
LAGAINDGMG VRAAEILGAD FSYMGTRFIA TEEAEVDPDY KSMLVDSQIS DLIYTDTFTG
VKCNFLKPSI ARAGVDLANF TAKTHVDLDL GESNAWKDFW SAGHGIAGIK HVLPMAELVE
QLKEEYRGAV AHPAFLNNQV
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