| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0306 |
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| Symbol | |
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| ID | 4172900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 355161 |
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| End bp | 356015 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053305 |
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| Product | ABC transporter related |
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| Protein accession | YP_659892 |
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| Protein GI | 109896637 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAG TGAATACAGA TGATAGTGCC CACAGCACAG GAAGCGCCCA CAGCACAGGA
AGCGGCCACA GCGTAGAAAG CAGAGAGACC GCAGAAAGCG CCCGCAGCTC AGTAAGCGAC
GAAAGTGCAG CAAAAGGCAA AAGCGCCGAC AATATTAAAA ACAAAGCCCC TCTGGCGATT
AATCTTAAAG GCGTTCGGCA TAGCTACGGC AAATCGAGCA ATGAAACGGT ATTGAGTATT
CCTCATTGGC AGCTCGCTCA AGGGGAGCGC GTATTCCTGC ACGGTGATTC CGGCTCGGGT
AAAACGACCT TATTGAATTT GCTATCTGGG GTACTTACCC CAACAGAAGG TAGCATCGAA
CTATTAGGTC AGCCTTTCTC TAGTTTATCG GCAAGGCGCA GAGACGCTTT TCGGGCACGC
CATATCGGCG TGGTGTTTCA GCAGTTCAAT TTGGTGCCTT ACTTAAGCGT GCTAAAGAAC
ATTCAGCTAG CCAATTACTT TGCTGCCAAG CGTGATAAAC ACATAGAAGA GTCGGTTAGC
GGCTTGTTGG CAAAGTTAAA TTTGCCTGCA GATGTGATGC ATAAACCTGC CAATACCCTG
AGCGTGGGTC AACAGCAGCG GGTGGCCATT GCCAGAGCGT TGATAAATCA GCCTGAGTTG
TTACTGGTAG ACGAGCCCAC CTCGGCGCTA GATGCCTCAG CACGAGATGC GTTTATGGAT
ATTCTACTGA ATATGTGTGA AACCGCGGGC GCGAGCTTGG TCTTCGTTAG TCATGATATG
TCATTAAAGC GTTTTTTTAG CACCAGTGTT GATATGCCCA GTTTGTGTCA GGGCAAGGGG
AATGCTGCAT GTTGA
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| Protein sequence | MKAVNTDDSA HSTGSAHSTG SGHSVESRET AESARSSVSD ESAAKGKSAD NIKNKAPLAI
NLKGVRHSYG KSSNETVLSI PHWQLAQGER VFLHGDSGSG KTTLLNLLSG VLTPTEGSIE
LLGQPFSSLS ARRRDAFRAR HIGVVFQQFN LVPYLSVLKN IQLANYFAAK RDKHIEESVS
GLLAKLNLPA DVMHKPANTL SVGQQQRVAI ARALINQPEL LLVDEPTSAL DASARDAFMD
ILLNMCETAG ASLVFVSHDM SLKRFFSTSV DMPSLCQGKG NAAC
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