| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0302 |
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| Symbol | |
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| ID | 4172896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 352178 |
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| End bp | 353173 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053301 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_659888 |
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| Protein GI | 109896633 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.782983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAC TATGTAAAGC AGTTTGTTTG GGCACTTTGG TTGCGATGAG CAGTGGCTGT
GTCATGCAAA GCCAGATTGT TTCCCCCCGT CTCGCTAAAC AGCCACCTAT AGCGCCGGCA
AGCCCACGCG TTGTAGCTCA AGATGTCGAC ATTGGGGCAG CGCAAGGCAG TGAAAACACC
TCTGGTATGG ATGGTTTCAA GGTGGTCACG TGGAATACAG AGCATTTTGC ATATCCCAGC
AACGCAGGGT GTAAACCAAG AACAAGCGAA GATATCGCGG CAATAAAAGC GTATATCGCT
GGGTTAGGTG CCAGTGTAAT CGCCTTACAA GAAGTGGCAT CAAGGGAGGC GCTGCGTTTA
GTTTTTCCCG AAAGTGATTG GACGTTGGTG CTTTCGGCCA GAGCTGACAG CCCTGCTTAC
GAGTGCAGAG AAAGCGGGTT TACCTCCACT CAGCAAAAAG TAGCGTTTGC GATTAAAAAA
GGCATTTCAA TTCTTCAAGT ACAGCAAAAT GCCCAGCTAG GATTGCAAAA AATAGGGTTA
CGCTTTGGCT TAGCCGTGAC GGTAGACACA CCGTTAGGCC CGACCGATAT ATTAAATGTA
CACTTAAAAA GCGGCTGTTT TGTAGATGAT TACGCAACGA GCGATAAAGC TGCATGTCAG
ACGCTCGCTC AGCAAGTTCC CGTGTTAGAA GAATGGCTTG CAGCTCACCA AACGTTGGGG
GTGCCTTACA TGGTGCTCGG TGACTTCAAT CATAGATTGG CAAGTGAAAA CAACTACTTA
GCTAGCAGAC TAACCAGTGA TGAATACGGT ATTGATATCG CCACACAAGC ATTACGTGGT
TGTCATCCTC GTTACCCTGA GCCGATTGAT CATATTTTGC TAGGAGGCAT GCAAAGCACA
TTAATAGCGG CATCCGCCCA TGTGCACAGG TATAAAAACA TGGATGAAGA GGCCATGTTG
AGCGACCACT GTGCGGTGTC ACTTTTTCTA AAGTAG
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| Protein sequence | MKTLCKAVCL GTLVAMSSGC VMQSQIVSPR LAKQPPIAPA SPRVVAQDVD IGAAQGSENT
SGMDGFKVVT WNTEHFAYPS NAGCKPRTSE DIAAIKAYIA GLGASVIALQ EVASREALRL
VFPESDWTLV LSARADSPAY ECRESGFTST QQKVAFAIKK GISILQVQQN AQLGLQKIGL
RFGLAVTVDT PLGPTDILNV HLKSGCFVDD YATSDKAACQ TLAQQVPVLE EWLAAHQTLG
VPYMVLGDFN HRLASENNYL ASRLTSDEYG IDIATQALRG CHPRYPEPID HILLGGMQST
LIAASAHVHR YKNMDEEAML SDHCAVSLFL K
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