Gene Patl_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0300 
Symbol 
ID4172894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp350413 
End bp351114 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content49% 
IMG OID638053299 
Producthypothetical protein 
Protein accessionYP_659886 
Protein GI109896631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.800671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCG CTACTCCACT GCACGACCAA GAACACGTCA CTGCTGGGCA ACGCACTAAC 
GCCTTAATGT CTGAAATGAC TCACTCGCAC AGTGACGAGT TCACTGTTCT GACCGATATT 
TACCAAGACA CGCACAATTT GGTTGTGTGG CAGCGTTCAC TTAGCGAAGA ATTGCTCGCT 
CATGTAGCAC ATTGCATAGA GGAAAATCCG CGCCTGAATC TCGAGAAGAG CATTCGTGCT 
AACGCTATTA TCGAAGATAT CAACGAGTTA TTAACTCCAC GTGGCTTCAA CGATGAGTTT 
ACTGACAACA TCGCGTCATT GGTGGATATG TTCTGCTGTT TGTTTGACTT AAAGCGGGTT 
GGATTGCGTC TAAAAGTGTT GGAACAAGCC ATGTGTCCTC GCTTCCATGT GGATTGGGTG 
CCGTGTCGGT TAGTCACCAC CTTTAGTGGC ACAGGTACCC AGTGGCTCCC CCACGATAAG 
GTTGATCGCA CTAAATTAGG CACGGGTAAT AACGGCATGC CAGATGATCA ATCAGGTTTG 
TATGCTGAGC CAAACGCGAT TCAAGCGCTG GCAGTAGGCG ACGTGGCACT GCTTAAGGGG 
GAAGGCTGGG AAGGAAATGA AGGCGCAGGC CTAGTGCATC GCTCACCACC TAATGAAGCG 
AATGAGAAGC GCCTATTATT GACCTTGGAC TTTATTTCAT AA
 
Protein sequence
MSIATPLHDQ EHVTAGQRTN ALMSEMTHSH SDEFTVLTDI YQDTHNLVVW QRSLSEELLA 
HVAHCIEENP RLNLEKSIRA NAIIEDINEL LTPRGFNDEF TDNIASLVDM FCCLFDLKRV 
GLRLKVLEQA MCPRFHVDWV PCRLVTTFSG TGTQWLPHDK VDRTKLGTGN NGMPDDQSGL 
YAEPNAIQAL AVGDVALLKG EGWEGNEGAG LVHRSPPNEA NEKRLLLTLD FIS