| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0294 |
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| Symbol | |
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| ID | 4172927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 343545 |
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| End bp | 344942 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053293 |
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| Product | putative lipoprotein |
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| Protein accession | YP_659880 |
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| Protein GI | 109896625 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0347372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATCA CACATAAATT TAATCTTCTC GCCGTGGCGA TTGGCGCAAT ACTTCTCACA
GGTTGTGGTG ACGCAGAAAC CACCCTCATC GAAAAGGATC CAATAGAAGT ACCTAATGAT
GACCATGACG ATGATCATGA CCACGACGAC AATGATGAGT TTCTAATTGA TTCAATGGGG
CGTATTGCGG TGCTTTCTGG CGAAAGTAAC GTAGCCAGTA TTTTTGATTT AGACGACAGT
GAACTATTAG ACACCTTCAG CCTAATTCAC ACCTCAAACA CCCTAACTTC ATCTGCAGAC
TATCGTTTCG CTGTTATCGC TAGCCGAAGC GAAGACTATG TTGGCTTTAT CGACGGTGGT
ATGTGGCAAG AAGATCACAC CGCGCATTTG CACGATTATG AGCAAAGCCC TGCCATGAGC
GACTTTGAGG TCGCCGGAAG CCGTCCTACG CATATTTTAA GTCATGATGG TCAATTGGCG
GTGTTTTTTG ACGGTGACGC GGATGCAGGA ACACCAGCAT CAGTGAAAGT TGCCACAGAT
ACGCAAATAA GCAGTGAAAC AGATCCACTG CCAACGCTAG ATTACACCGT GAATATGCAT
GGCGTAGCCG AAGCTCGAGG GGAATATCTG CTCGCTACCA TTCGCCGTGA TGACGCTGAA
AGCACCTCTG CTGCGAAAAT TCTACCGGAC CAAGTAGGCG TCTATCACTT GCATGACGAC
GAGTATGAGC AAGAACAGGT ACTTGACGTA TTGTGCCCTG ACTTACACGG GGCTGCACAA
AACGAAGATT ACGTTGCATT TGGTTGTACT GATGGAGTAC TTGTGGCCCA TGAGCATGAC
GGCGAATACG AAGCAGAAAA AATCGCCAAT ATCGATATAC TAGATGGCCT ACGCATTGGT
ACGTTATACG GCCATGAAGA AAGCGAATCA CTGATTGGTG TCGCATCTGG TCACGGCGGC
GGTGAAGCTA CGCTAATCGC TGTAAACCCA TCACAAGGCA CCATGGAAGA GCTCGAGTGG
CAGCCTGAAA GCCCAGCGGA TCCTGTATCC TATGCATTCT CTCATGAAGG CGATGCCTTT
TTAGTCCTCG ACAGCGAAGG CTATTTGAAT GTGCTAGAAG CCCATGAAGA AGACGGGGGG
CAGCACTGGG AACTACACGC GCGTTTAGAT ATCACTGAAG AGGATGTATC CACCATGCCA
GAAGGCATGT CGTTTAGCAT GACAGTAGCG CAAAATGGTC ATTACGTGTA TATCGCAGAT
CCTATTGCAC AGCATATCCT ACAAATTGAC CTTGAAACGT TAACCATCAC AAGTGACATC
GAACTCGATT TTGCCCCTGA CAGCATCACT TGGTTAGGAA TAGCAGAGGC CGACCACGAT
GAGCATGACC ACGATTAA
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| Protein sequence | MTITHKFNLL AVAIGAILLT GCGDAETTLI EKDPIEVPND DHDDDHDHDD NDEFLIDSMG
RIAVLSGESN VASIFDLDDS ELLDTFSLIH TSNTLTSSAD YRFAVIASRS EDYVGFIDGG
MWQEDHTAHL HDYEQSPAMS DFEVAGSRPT HILSHDGQLA VFFDGDADAG TPASVKVATD
TQISSETDPL PTLDYTVNMH GVAEARGEYL LATIRRDDAE STSAAKILPD QVGVYHLHDD
EYEQEQVLDV LCPDLHGAAQ NEDYVAFGCT DGVLVAHEHD GEYEAEKIAN IDILDGLRIG
TLYGHEESES LIGVASGHGG GEATLIAVNP SQGTMEELEW QPESPADPVS YAFSHEGDAF
LVLDSEGYLN VLEAHEEDGG QHWELHARLD ITEEDVSTMP EGMSFSMTVA QNGHYVYIAD
PIAQHILQID LETLTITSDI ELDFAPDSIT WLGIAEADHD EHDHD
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