| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0290 |
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| Symbol | |
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| ID | 4172923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 337355 |
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| End bp | 338494 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053289 |
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| Product | oxidoreductase-like |
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| Protein accession | YP_659876 |
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| Protein GI | 109896621 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0348948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA GCATAAAAGT ATTAATACAA GGTACAGGTT TCGCTGGGCA AGGCCACGCA
GATGCGTTTA GGTCGGTCGG CGCTGAGGTG GTGGGTATTG TCGGCAGAAC GCAAAGCGTT
GTCGAACAAG TCGCTAAAGA CATGGATATT CCTTTTGCTG GCACAAATTG GCAGGAGGCA
CTGGCTGAAT GTAAGCCTGA TGTGGTGTCT ATTGCCACGC CAGGTGGGGC TCATGAGGAA
GCGATTACCC AAGCCATTGA GTTTGGATGC CACGTGTTTA GCGATAAGCC TTTGACCGCG
ACTGGCGAGT CCGCTAAAAA GCTACATGAA TTAGCGCTTG AGAAGAACGT AAAAACAGCT
TTCGCGGCCA GTTTTAGGTA CATGCCTGAT GTCATATACG CTAAGCGAAT TGTGGCGGCG
GGAGCCATAG GCGAGCCACT AGAAGTGGAG TGTATTTCGC ACTTCAATTT AGAGCGAGAT
ATTCCCTTTG GATGGTCGCA TCGTAAGGAA GACGGCGGCG GGCGTTTGAA TAATAACTTT
ACCCATAAGC TTTCGATTGT CACTTCAATC ATCGGTGAAA AAATACTGTC GGTAATGGGC
GAGGTGCGTG ATGACTTAGG GCGAGCACCA ATAGTGGAAG GTGTGCACAA CTTCAAAAAG
CGCCGTGATT ATATTCCTGA CGATCTCAAT GACCCCGCTT TAAAATGGGG AGAATCAAAT
GTGGAATGGT CATATACGGT GCTAGCGAAA CTCGAAAGCG CATTGGCCGA AAAGCCGGTA
TCTGTGTTGT TCAAGCATGG CGGTTTGCAT CCGCGTTTCA ATGAAGATCA TATTGTTATT
TATGGCAGCA AGGGCGCTAT TTACATCAAA GGTCATTATG GCAGCGGCCC TTTGTATTTT
TACGACTGTA ATAACCATTG GACGCGGTTG CCGTTACCGG ATGATATCGT CGAAAACACC
CCACAGGGCG AAGGCGATAC AGAGCGTAAT TGGCGCTACC TTATTCGCGA GTTAGTTAAA
GATATTCGAG GGGAAAAGGT ACTTCCCTAT CAAACGTTTA AAGAAGGTGC TCAATATCAA
CAACTAATTG ATATTATTCG TAAAAATGAT AATTGGGTTG ACGTTAGTCA TCTTCAATAA
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| Protein sequence | MSKSIKVLIQ GTGFAGQGHA DAFRSVGAEV VGIVGRTQSV VEQVAKDMDI PFAGTNWQEA
LAECKPDVVS IATPGGAHEE AITQAIEFGC HVFSDKPLTA TGESAKKLHE LALEKNVKTA
FAASFRYMPD VIYAKRIVAA GAIGEPLEVE CISHFNLERD IPFGWSHRKE DGGGRLNNNF
THKLSIVTSI IGEKILSVMG EVRDDLGRAP IVEGVHNFKK RRDYIPDDLN DPALKWGESN
VEWSYTVLAK LESALAEKPV SVLFKHGGLH PRFNEDHIVI YGSKGAIYIK GHYGSGPLYF
YDCNNHWTRL PLPDDIVENT PQGEGDTERN WRYLIRELVK DIRGEKVLPY QTFKEGAQYQ
QLIDIIRKND NWVDVSHLQ
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