| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0289 |
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| Symbol | |
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| ID | 4172922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 335571 |
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| End bp | 337343 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053288 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_659875 |
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| Protein GI | 109896620 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0322805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTATG AATACTTGGT TATCGCTGGC TACTTTTTAT TGATCCTGGG CATTGGTTTT
GCCTTTAAGA ATATGGCGAA AAACTCCACC AGTGATTACT TTCGTGGTGG TGGTCGCATG
TTGTGGTGGA TGGTTGGCTC GACGGCGTTT ATGGCGCAAT TTTCCGCATG GACATTCACA
GGGGCTGCGG GCAAGGCTTT TACCGACGGC TTTGCAATTA GCTTGGTATT TTTCGCCAAT
ACCATTGCTT ATTTTTGTGG CTGGGCGTAT TTCTCGGCAC GCTTTCGCCA GATGCGGGTT
GATACCCCAA CAGAAGGTAT TAAACGGCGT TTCGGTAGCC AAAACGAGCA ATTCTTTTCT
TGGGCGTTAA TCGTTTTTAG TTTTATCAAC GCAGGTGTGT GGCTAAACGC ATTAGGCGTA
TTCGCCAGCG CCGTGTTTGA AGCGGACATT ACCTTAACCA TAATCGTGAC CGGGTTAACC
GTGGTGTTCG TATCGGTGCT GTCTGGTGCT TGGGGCGTTG TGGCATCTGA CTTTGTGCAA
ACCCTTATCG TAGCGGTTAT CTCGGTGGCG TGTGCCATCG TTGCCCTCGT GATGGTGGGC
GGCCCAGTCG AACTGGTAGA AAACTTTCCA ACCGATTTTG TGATGGGCCC TGATATGAAC
TACGGGGTAA TTTTAGTCGG TACCTTTATC TTCTTTTTGG CCAAGCAAAT GATCACCATC
ATGAACATGC ATGACGCCTT TCGATTTTTA AACGCAAAGG ACTCAGACAA TGCCCGCAAA
GCCGCACTGC TGGCCATGGT ATTGATGGGA ATTGGCAGCA TAGTGTGGTT CATACCGCCT
TGGGCGTCAG CGATTTTATA CCCTGATGCG GCGGCGTCAT ACCCTGAATT AGGCAACAAA
GCGGCCGATG CGGTGTATTT GGTGTTTACC CGAAACGCTA TGCCGATGGG TACTGTTGGT
TTGTTACTCG CAGGGTTATT TGCTGCAACA ATGTCGTCGA TGGACTCGGC ATTGAATAAA
AACGCCGGTA TTTTTGTGCG CAGTATTTAC CAACCCTTTT TGCTTAAAAA GAAAAAGAAC
GTAGGTGACA AACAACTGCT AACGGTCAGT CGTTGGGTGA GCTTCATCAG CGGCATTCTG
GTCATTGTGG TGGCACTGTT CTTTAAGTCA TTGAAAGAAC TAAGCCTGTT TGAGCTGATG
ATGAGTGTAT CGGTAATGGT CCAAGTGCCG TTACTCGTAC CATTAATCTT CGGCTTGTTC
GTAAGGAAAA CGCCGAACTG GGCACCTTGG GTAACGGTGA TAATCGGTAT GCTGGTATCG
TATTTAACGG CCAACGTATT CACCCCACAA GTATTTGCCA ATTGGATAGG CTTAGAGCAA
GCCTTTACGC GCCGGGAATC AATCGACGTT AATTTGATGA TTACCATCGC CGCGCACTTA
GTGATCACCG CAGGGTTCTT TTGTTCAACT TCGTTTTTCT ACCAAGAGGA ACGAGACGAG
CATAAAGAAG GAACAGATCG CTTCTTTACC GATCTAGAGA CGCCTGTCAT TGCCGACTTC
GAACAAGACG AATACGACAA ACAACAACGC CACAAATTGG GCTCCATGGT GATGTTTATG
GGAGGCGGTA TGGTCGTAAT GATGTTGATA CCCAACCCGA TGTGGGGTCG CATGGTATTC
GGCTTGTGTG CGATAACCAT TTTAGTAATG GGTTATTTGT TAAGAAATAG CGCTAAGCCA
AAGCGTGATT CGCTTCAGGC AGAAAAGGGG TAA
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| Protein sequence | MFYEYLVIAG YFLLILGIGF AFKNMAKNST SDYFRGGGRM LWWMVGSTAF MAQFSAWTFT
GAAGKAFTDG FAISLVFFAN TIAYFCGWAY FSARFRQMRV DTPTEGIKRR FGSQNEQFFS
WALIVFSFIN AGVWLNALGV FASAVFEADI TLTIIVTGLT VVFVSVLSGA WGVVASDFVQ
TLIVAVISVA CAIVALVMVG GPVELVENFP TDFVMGPDMN YGVILVGTFI FFLAKQMITI
MNMHDAFRFL NAKDSDNARK AALLAMVLMG IGSIVWFIPP WASAILYPDA AASYPELGNK
AADAVYLVFT RNAMPMGTVG LLLAGLFAAT MSSMDSALNK NAGIFVRSIY QPFLLKKKKN
VGDKQLLTVS RWVSFISGIL VIVVALFFKS LKELSLFELM MSVSVMVQVP LLVPLIFGLF
VRKTPNWAPW VTVIIGMLVS YLTANVFTPQ VFANWIGLEQ AFTRRESIDV NLMITIAAHL
VITAGFFCST SFFYQEERDE HKEGTDRFFT DLETPVIADF EQDEYDKQQR HKLGSMVMFM
GGGMVVMMLI PNPMWGRMVF GLCAITILVM GYLLRNSAKP KRDSLQAEKG
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