| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0279 |
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| Symbol | |
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| ID | 4171958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 325456 |
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| End bp | 326493 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638053278 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_659865 |
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| Protein GI | 109896610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTAC GATCCCGCTA TTTAATGATT ATTATGTGCT TTATCACCAC CCTAGCAAAT
GCTGCTCGCT CGCCCTTCGA ATTAGCAGGC AACAGCATTC CTGCAGGTGA GCAGCGTTCA
TTTTTTGCCA ACGTTACGGA TACTGATATG CAGGTCCCGA TCACCGTTTT CCATGGGGTT
GACTCAGGCC CGGTCTTGAC CTTTTCTGCC GGAACCCATG GCGACGAATT CCCAGCAATC
ACAGCCCTAC AACGCTTGCG CTCAGAGGTT GACCCAGCTG TACTCAAAGG AACGCTTATT
CTTGTGCATG CGGCAAATTT GCCTGCGCTT CACCAATACG GCCTAAGCGC TCTGCATCCA
AATGACAAAA AGAATCTAAA TCGGGAGTTT CCTGGCAACG CCAAAGGTTC TGATACAGAG
CGTCTTGCGC ATTTTTTAAC AGAAGAGATC ATCGGCAGTA GTGACTATCT TGCTGACTTG
CATTCAGGGA GCGCATATCA GCAACTATGG CCGCATATAT ACGCGCCCTT CGTGGGTGAT
AATGCACTAG ATGCTCGCAC TCTGGCCTGG GCCAAAGCCT CCGGCATGCG TCATATCATT
TTATACGGTG ACCGCCCAAG AGATCCCGCC AATTCAATTA GTTACCCGAA TACAGCAATG
ACACGTGGCA AGCCCGGCCT GACGCTAGAG ATAGGTGATC GTGGCCATAA CGAAGAAGTA
GACGTGCTGG CATATCTTGA TGCACTGCGC CGTCTAATTG CGGGTATCGA CATGCTTCCT
AGCACCTTAC CTGCTTCAGA AGGTCAAACT ATTTACGAAC AACTTGTCGA AGTAGAAACC
CCAGTAAAAG GCTTTTTTGA GTCTAAGTGT GAAATTGGCG AATTTGTACA GCAAGGGGCG
CTACTAGGGA TAGTGCGCGA TTACTTTGGT GAACCTATCG CTGAGCTTCG GGCGCCAAAC
CGCGGTGTGG TGTTGATGCT TCAAAACGCG CCGCCAGCGA ACAAAGGGGC AGCGTTGATA
ACCATTGGTG TCCAGTAA
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| Protein sequence | MHLRSRYLMI IMCFITTLAN AARSPFELAG NSIPAGEQRS FFANVTDTDM QVPITVFHGV
DSGPVLTFSA GTHGDEFPAI TALQRLRSEV DPAVLKGTLI LVHAANLPAL HQYGLSALHP
NDKKNLNREF PGNAKGSDTE RLAHFLTEEI IGSSDYLADL HSGSAYQQLW PHIYAPFVGD
NALDARTLAW AKASGMRHII LYGDRPRDPA NSISYPNTAM TRGKPGLTLE IGDRGHNEEV
DVLAYLDALR RLIAGIDMLP STLPASEGQT IYEQLVEVET PVKGFFESKC EIGEFVQQGA
LLGIVRDYFG EPIAELRAPN RGVVLMLQNA PPANKGAALI TIGVQ
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