Gene Patl_0274 details

Gene Information

• Locus tag: Patl_0274
• ID: 4171953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 320842
• End bp: 321492
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638053273
• Product: redoxin
• Protein accession: YP_659860
• Protein GI: 109896605
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTAC AGGCGCAAAT AGCCGAATAC GAAAAACAGA AAAATGCCAC CGCGCCCAAG 
GACGTATTAA ACGTTATGGC CCTAGCCACC AGTGATTTGA TGGCAACGGA TATTTCTTCT 
GATGCTTTAC AAGTGGGGGA TTACGCGCCT GATTTTAGTT TGCCAAATGT GCATGGTAAG 
CTCGTCACCT TAGCTGAAAT GCTGGCCCAC GGGCCCGTGG TGTTAAATTT CTATCGCGGT 
GGTTGGTGTC CTTATTGCAA CTACGAGCTT CGAGCATTTG AAGAAGTGCT GGAACGCATC 
GAAGATTTAG GGGCGCAGTT GGTGGCAGTG TCCCCCGAAA CGCCAGATAA CTCACTCACC 
ACCAAAGATA AAAACGAGTT GTCTTACGCT GTATTGTCAG ATGTGGGCAA CAATGTGACG 
AATGACTACG GTCTGGTATT TAGCCTAGAC GAGCGCTTAC GGCCAATTTA TTCGCATTCA 
GGAGTAGATC TTCCCGCTTT TAATGGTGAT GACACCTTCA ATTTGCCCAT GCCTGCAACG 
TATGTCATCA ATCAAAGCGG CCAAATTGTG TATGCGTTCG TATCTGAAGA TTACACTAAG 
CGCTCAGAGC CATCTGAGGT CTTGAAAATT TTAACCACAC TTGATAACTA A 

 

Protein sequence

MSLQAQIAEY EKQKNATAPK DVLNVMALAT SDLMATDISS DALQVGDYAP DFSLPNVHGK 
LVTLAEMLAH GPVVLNFYRG GWCPYCNYEL RAFEEVLERI EDLGAQLVAV SPETPDNSLT 
TKDKNELSYA VLSDVGNNVT NDYGLVFSLD ERLRPIYSHS GVDLPAFNGD DTFNLPMPAT 
YVINQSGQIV YAFVSEDYTK RSEPSEVLKI LTTLDN