| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0261 |
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| Symbol | |
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| ID | 4171940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 304753 |
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| End bp | 308532 |
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| Gene Length | 3780 bp |
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| Protein Length | 1259 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053260 |
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| Product | hypothetical protein |
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| Protein accession | YP_659847 |
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| Protein GI | 109896592 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTAT TGAAATATTT AGGCATATTC CTTTGCGTTT TGGTTTTGTT AATCGCTGTA
ATTGCATCGC CTTGGGGTAC AAGAGGCGTG CTGTCCATCG CTGATAGCAG TGTAGACGGG
TTGGACATCG ATTACGATTC AGGCAGTTTG CTTTCTGAGC TGTCGCTCAA AAGGTTAGTA
TTCTCGACGC CAGATTTAAG CTTGCAGATC AAAAAACTAG CCGTCGATGT TAATTGGTCT
TGCGTGGCTA CGATGCAAGC ATGCCTATCT GAGCTTAGGG CGCAAAGTAT TGGCGTTAAC
GTCACCCCTA GCGAATCGTC TGAGCCCGAA AGTACTGAAC CGTTAGGGCG TATCACGCTG
CCATTGCCGG TATCCGTGGA TCATTTAGAC GTGCGTAACA TTCGAATCGA CGTGGTCAAT
ACAGTAGGTG TAACAATACG GTCTGTATCC AGTGAGCTCA GCATGTTCCG TACTTTGCAC
ATCGACCACT TGGCAGTTAA TGGTATTCGC GTTGAGTTAC CTGAGGCCAG CCCTGAAGCG
AAGTCCACTG ATAATCAACT GTTAGACTTG CAAACAATCG CCAATTGGCA ATACACGCCG
ATAACGCTGC CGGCTATTGT GTTTCCAATT GTTATGCGCG GAAATAATTT GGCGCTGGAT
GACCTAGTGG TTTCTCAAGG CAAAGCGTCG CTTATTGATA TCACGAAGCT GCGAGCAACC
ATCAATATTA CCCCTAAATT ACTCACGGTG AAAAAGTTGC AGCTAAGCTC TAGCTTAGGG
GAGGCAGACT TAACCGCTAC CCTGGGTAAG CAATGGCAGC ACCAAGCAAC GTTGTTGTTC
AATACTACTA CCAATAGCCC ATATCCTATG AACGCTAAGC TGAATCTCAA GGGGAATTTG
CAGCACAGCG AACTTAAGCT CAATACCACC GGCTTAGTTG ACTTAACGGC CAGTGCTAGC
GCTGATTTGC AGTCAAAGCA ATTACCTCTT GCTCTTGAGG TCAATTGGCA GCCAGTCGAG
TGGCCGATAA AGCAACCACA ATTACTGATT GAAGAAGGCC AGCTGACGCT GTCTGGAGAT
ATTAACCAGT ATAAATTGGC CTTAGATACC GCCCTCAAAG GCGCTTCAGT CCCCCAATCG
ACATTGACCG TGCGCGCTGC GGGCAACAAT CGCCAAGTGC AGCTTACTCG ATTGGCCATC
GATACCCTTG GGGGGCAAAT ACAGGCGTCA GGAAATGCCA CCCTAGATAC CTTAGCAAAA
TGGCAAAGTC AGCTTCAGTT TACTGATATT CAACCCCAAC GCTTTTGGCC CAAACTGGAC
GCTAATATAC AAGGCGAGCT TAGCCTTGAC GGGCAATATG ATGGCCAAAA CATACTGGCC
CAGATGCGTG ATCTTGTTGC ATCTGGCAAA TGGTTAGATT ATCAGTTAAG TGCTTCTGGC
GAAGCGAACT TTGACTCACA AGAAGGGCTT GAAATCCCCG AATTGTTGGT TAAAACAGGT
GACAATCAAA TCACCCTTGT CGGTTCATTA GAGGCCTTTG AAGACGTACA GGCGCAATTG
ACTGTCGACG CGCAAGACTT ATCTCAGTTG TATCCCTCAT TTGCTGGCAG GGCAAAGTTT
GAAGCGCAAA TAGATGGCAC AATCTCTGCC CCTGAGGCCA ACTTTAGTGG CTCTGCTGAT
AACATCGATA TACCCGATAT GCGTATCGCA CAACTCGCGA CCAAAGGGCA GGTTATTTGG
GATGCTCAGA AACAAGCCAA CATCGAATTG CAACTTAGCA ATAGCGTTAT TAGCCAGCAA
AGAATAGCGA ATTTAAATGT GGCTTTGAAC GGTGATGCAC AGGATCACCA ACTGAGTTTA
TCGCTTAATA GCAACATGGC TGACGTCGTG ACTAAATTGC ACGGAAGTCT GTTGGATAGC
CATTGGGATG GCGCGCTAGA TGTACTTACC TTTGCCTCAG ATGCAGGCCA ATTTGGTTTA
GAGGATGAGG GGCCTAGCAT ATCCGCTAAT TGGGCGACTG ATGAATATCG TGTCGCGCCA
CTCTGTTTAT CTGATAACGA TGCTCGCGTG TGCATTCGCC TTGCTGAGTA TGCAGCCACT
GGTGCCCAGT TTGATCTGGC GATTGACGAC TTACCCTTAG CTCCATTGCT AAGCGCTAAC
TTAGCGCAAC TGCAAAAGAT AGATACCGAT GCCAAAGTAA ACTTAGTGGC TAAAGGCGAT
TGGGACACAA AAAAACTGCC TATTATTGAA GCTAATATCA GTTTAACGCC CTCAACCTGG
ACGGTAGAGG GGGCGAGTAC ACCCCTTGAG TTAGATGTGC TTGACATGCG TGTTAACACC
ATAGTCGATA AAGTGGACGC TAAAACCGCA GGTAAAAATG ACCCACCTCA GCATGTAGTT
ACGCAGTTGA CACTGCAAAG TAAGCAATTA GGCGAGGTGC ACTCAAATGT TGACTTGCAA
TTAAATGACC AAGACAAGCC GCTTTCTGGT CAGCTAACGT TAAGCAATAT TACCCTAGGT
GCTGCAGCCC AATTTGTACC GCAATTGACT GAACTCGCTG GGCGTATCGA TGGCCAAATA
GAGCTCGGCG GAAACTTAAC CGCGCCATTA ATCAAAGGAG AGGTAACGTT AGTTGAAGGT
GCCCTCGCGG GCTCAATGCT GCCATCGCGT ATTCATCAGG TTGAGCAAGT TATTACGTTT
ACTGGGCAGG CGGCGACGCT GAGCGGGCCA TTCCAACTGG GCAACGGAGA GGGCCAAATA
GACGGTGAGT TCAGTTGGCA AGATACCCCT AGCGCGACAG TGAACGTTAA GGGAGATGAA
ATGGAAATCG ACTATCAGAA TATCGTCAGG GCTAAGTTAT CGCCTGACAT CAATGTGCAA
TTTGGGGAAG CAGGATTATC GGTTAAAGGA GAAGTCACTT TACCCTACGC CCGTATTAAG
GTGAGGGAGT TGCCACCCAG TGCTTTATCA CCTTCTAGTG ATGTGGTGTT GGTGAATCAT
GAGCAAGTCG CTAAAGAAAA CAGTTTACCG CTGGATTTAT CTCTACAAAT TAACATTGAC
CCAGACAAAA ATAATGACGT CAAAGTGGAT GCATTCGGTT TGACCTCAGA CTTAGAAGGC
GCATTGTTAT TAACGCAAGC TGGCGAAGTC CTTAATGCTA ACGGTGAGCT GAATTTGGTC
AATGGTCGCT ACCAAGCTTA TGGCCAAGAT TTGGTGATAC GAGAAGGAGA AATTCAATTT
AGCGGCCCGA TAGATAGCCC ATATCTTGCG GTGGAGGCAA TTCGAGATCC TAACAAAACC
GCGGATGATG TGATTGCAGG CTTGCGAATT CAAGGCAGCG CGTCAGAGCC TCAAGTCAGC
GTATTTTCAG ATCCAAGTAT GGAGCAGCCA GAGGCGCTTT CGTATCTGTT GCGCGGCACT
GCAATCAATA GTACTGATGA ATCCTCAAGC GACGGGGCAC TGGCCAGCGC GTTAATCGGG
TTTGGTTTAG GTAAAAGTGA AAACAAAGTG ACTAATATCG GGCGCAAACT GGGCGTAGAA
GATCTCGCTT TAAATACCAG TGGTACGGGA GACGAAACCA AGCTTTCGGT TTCTGGTTAT
ATCGCGCCTG GTGTGCAAAT TCGCTACGGT GTAGGGGTGT TTGACTCTGT TTCAGAAGTT
GCTCTGCGTT ACCAGCTATT GCCAAAACTG TATCTGGAAG CGGTGAGCAG TTTAAACAGC
GAGCTGAACT TATATTATCA ATTTACTCTT GATGACAAAG AAGAGTCAAA GCCCGAGTAA
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| Protein sequence | MRLLKYLGIF LCVLVLLIAV IASPWGTRGV LSIADSSVDG LDIDYDSGSL LSELSLKRLV
FSTPDLSLQI KKLAVDVNWS CVATMQACLS ELRAQSIGVN VTPSESSEPE STEPLGRITL
PLPVSVDHLD VRNIRIDVVN TVGVTIRSVS SELSMFRTLH IDHLAVNGIR VELPEASPEA
KSTDNQLLDL QTIANWQYTP ITLPAIVFPI VMRGNNLALD DLVVSQGKAS LIDITKLRAT
INITPKLLTV KKLQLSSSLG EADLTATLGK QWQHQATLLF NTTTNSPYPM NAKLNLKGNL
QHSELKLNTT GLVDLTASAS ADLQSKQLPL ALEVNWQPVE WPIKQPQLLI EEGQLTLSGD
INQYKLALDT ALKGASVPQS TLTVRAAGNN RQVQLTRLAI DTLGGQIQAS GNATLDTLAK
WQSQLQFTDI QPQRFWPKLD ANIQGELSLD GQYDGQNILA QMRDLVASGK WLDYQLSASG
EANFDSQEGL EIPELLVKTG DNQITLVGSL EAFEDVQAQL TVDAQDLSQL YPSFAGRAKF
EAQIDGTISA PEANFSGSAD NIDIPDMRIA QLATKGQVIW DAQKQANIEL QLSNSVISQQ
RIANLNVALN GDAQDHQLSL SLNSNMADVV TKLHGSLLDS HWDGALDVLT FASDAGQFGL
EDEGPSISAN WATDEYRVAP LCLSDNDARV CIRLAEYAAT GAQFDLAIDD LPLAPLLSAN
LAQLQKIDTD AKVNLVAKGD WDTKKLPIIE ANISLTPSTW TVEGASTPLE LDVLDMRVNT
IVDKVDAKTA GKNDPPQHVV TQLTLQSKQL GEVHSNVDLQ LNDQDKPLSG QLTLSNITLG
AAAQFVPQLT ELAGRIDGQI ELGGNLTAPL IKGEVTLVEG ALAGSMLPSR IHQVEQVITF
TGQAATLSGP FQLGNGEGQI DGEFSWQDTP SATVNVKGDE MEIDYQNIVR AKLSPDINVQ
FGEAGLSVKG EVTLPYARIK VRELPPSALS PSSDVVLVNH EQVAKENSLP LDLSLQINID
PDKNNDVKVD AFGLTSDLEG ALLLTQAGEV LNANGELNLV NGRYQAYGQD LVIREGEIQF
SGPIDSPYLA VEAIRDPNKT ADDVIAGLRI QGSASEPQVS VFSDPSMEQP EALSYLLRGT
AINSTDESSS DGALASALIG FGLGKSENKV TNIGRKLGVE DLALNTSGTG DETKLSVSGY
IAPGVQIRYG VGVFDSVSEV ALRYQLLPKL YLEAVSSLNS ELNLYYQFTL DDKEESKPE
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