Gene Patl_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0258 
Symbol 
ID4174005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp301220 
End bp301822 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content41% 
IMG OID638053257 
Producthypothetical protein 
Protein accessionYP_659844 
Protein GI109896589 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA CACAGTGGGC TGATAAAATT TTAGATTGGG CCCAGCTCTA TATGGGGAGC 
CTTATTTGGA CTCTGGTAAT GCTATTTGTG TATGTTTTAG TCACTAAATG GACATTGCCC 
AGGATAGAAA AGAAAATAGA TGAAAGTAAT TTAAAGTCAC CTGAGGTACT GCGGGCCTAT 
CACATCATTC GACTGGTAGT CGGCATTCTC ACTTTCGCGA TAATACTCAT CGCTTGGGGC 
ATAGATTTTA GTGGCTTACT GGTGATTTCT ACGTCTCTCA TTACATTGAC CGGTGTGGCA 
TTCTTCGCGA GTTGGTCTTT GCTGAGTAAC ATAACAGCTT ACTTTCTGCT GTTATTTCAA 
ACGTCATTCC GCCGAGGTAA TTTTATTCGC GTATTGGATG CTGATAACTA TGTGGAGGGC 
TTTATCACTG AGATCAACTT ATTCAATACT AAGCTCATCA CCGAAGACCG AGAAATTATC 
GTTTATCCAA ACAATCTCAT TCTAACTCGC CCTAGTATCA TCAACCCCAG AGCGAAGTGG 
AAAACAGTGG GTAAGTTTAC CGATAGACCA GAAAAGAAAA TGCCGCAAAT ACGTAAAAAA 
TAA
 
Protein sequence
MLKTQWADKI LDWAQLYMGS LIWTLVMLFV YVLVTKWTLP RIEKKIDESN LKSPEVLRAY 
HIIRLVVGIL TFAIILIAWG IDFSGLLVIS TSLITLTGVA FFASWSLLSN ITAYFLLLFQ 
TSFRRGNFIR VLDADNYVEG FITEINLFNT KLITEDREII VYPNNLILTR PSIINPRAKW 
KTVGKFTDRP EKKMPQIRKK