Gene Patl_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0254 
Symbol 
ID4174001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp296594 
End bp297028 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content42% 
IMG OID638053253 
Productglobin 
Protein accessionYP_659840 
Protein GI109896585 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA TCAAACCATT ATTTGTATTA TTCCTAATAT CGCTTGCTTT CGGGATAAGT 
GCCTGCGCAT CAAATGCGCA ACCATCAGTA TATGCTCAGA TGGGCGGCCA GCCAAAGGTA
GAAGAAGTAG TAGACAATTT CATTACAGAA ATCGAATTCG ATCCGGTTAT TTTCGAATAT
TTTACGGATA CAGATGTTGA CCGCTTCAGA GAAAAGCTGG TTGAACATGT ATGCCACCTT
ACCGGAGGGC ATTGTGAATA CACGGGCGAC ACTATGGCCC GTGTTCATGC AGGCATGAAC
ATCACTGAAA CCGATTTTAA TCGAGGGGTC GATTTGTTTA TAAACGCAAT GAACAAGGCA
CAAATACCTC ACCCTATACA GAACAAGGTT TTGGCAATAC TGGCTAAGAC TCGCAAAGAG
ATGATTTACT TGTAA
 
Protein sequence
MNAIKPLFVL FLISLAFGIS ACASNAQPSV YAQMGGQPKV EEVVDNFITE IEFDPVIFEY 
FTDTDVDRFR EKLVEHVCHL TGGHCEYTGD TMARVHAGMN ITETDFNRGV DLFINAMNKA
QIPHPIQNKV LAILAKTRKE MIYL