Gene Patl_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0253 
Symbol 
ID4174000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp296014 
End bp296487 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content45% 
IMG OID638053252 
Producthypothetical protein 
Protein accessionYP_659839 
Protein GI109896584 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA ACAAAAGCTT AACGCCAGAG CAGCTGGCTG AATTCGTCAT CGAGTTTTTT 
CAATCCAGTA TGCCCTTTAA CCAAGCGCTG GGATTTCAAA TTGAAACCTT AGCTGATCAT
GAAGTGCAAA TACGTATGCC TTGGAGCAAC ATGCTTATGG GTAACCCGGT ACATAAAATT
TTGCACGGGG GCGCAACCGC TGCCATTCTC GATACAGTAG GCAGTGTGGT TGCTCTTATG
TATGGAATAA AGCAGCTTAA GCCTGAAGAG GTGGAAGAGT TCAAAAATAC TTTGGCCAAC
AACGGTACCA TTGATATGCG AGTAGATTAC TTGCGCCCAG GTAAGGGGGA AGAATTCATA
GCAACTGCTA GCGTTATTCG CAGGGGAAGA AGGGTAGCTG TATGTAGAAT GGAGTTACAT
AATGAAAAAG GTCAACATAT TGCCTCCGGC ACGGGGACCT ATTTAGTCGG GTAA
 
Protein sequence
MSDNKSLTPE QLAEFVIEFF QSSMPFNQAL GFQIETLADH EVQIRMPWSN MLMGNPVHKI 
LHGGATAAIL DTVGSVVALM YGIKQLKPEE VEEFKNTLAN NGTIDMRVDY LRPGKGEEFI
ATASVIRRGR RVAVCRMELH NEKGQHIASG TGTYLVG