Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0253 |
Symbol | |
ID | 4174000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 296014 |
End bp | 296487 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053252 |
Product | hypothetical protein |
Protein accession | YP_659839 |
Protein GI | 109896584 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA ACAAAAGCTT AACGCCAGAG CAGCTGGCTG AATTCGTCAT CGAGTTTTTT CAATCCAGTA TGCCCTTTAA CCAAGCGCTG GGATTTCAAA TTGAAACCTT AGCTGATCAT GAAGTGCAAA TACGTATGCC TTGGAGCAAC ATGCTTATGG GTAACCCGGT ACATAAAATT TTGCACGGGG GCGCAACCGC TGCCATTCTC GATACAGTAG GCAGTGTGGT TGCTCTTATG TATGGAATAA AGCAGCTTAA GCCTGAAGAG GTGGAAGAGT TCAAAAATAC TTTGGCCAAC AACGGTACCA TTGATATGCG AGTAGATTAC TTGCGCCCAG GTAAGGGGGA AGAATTCATA GCAACTGCTA GCGTTATTCG CAGGGGAAGA AGGGTAGCTG TATGTAGAAT GGAGTTACAT AATGAAAAAG GTCAACATAT TGCCTCCGGC ACGGGGACCT ATTTAGTCGG GTAA
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Protein sequence | MSDNKSLTPE QLAEFVIEFF QSSMPFNQAL GFQIETLADH EVQIRMPWSN MLMGNPVHKI LHGGATAAIL DTVGSVVALM YGIKQLKPEE VEEFKNTLAN NGTIDMRVDY LRPGKGEEFI ATASVIRRGR RVAVCRMELH NEKGQHIASG TGTYLVG
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