| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0249 |
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| Symbol | |
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| ID | 4173996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 290795 |
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| End bp | 291232 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638053248 |
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| Product | hypothetical protein |
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| Protein accession | YP_659835 |
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| Protein GI | 109896580 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00650906 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACAAATA GTTTACCGAT TTGGCAACAA TTTCAGTTAA GCCTTCGTGC TAAACCTAGA
GGATTTCATC TCATCACAGA TGAAATAGGG AAGCAGTTAG AAGTTTTAAC GACGGTAAAT
ATTGGCATTC TGCATCTGTT TATTCAGCAT ACAAGTGCCA GTTTGACGAT TAATGAAAAT
GCAGACCCAA CAGTCAGGTC AGACCTAGAG AGTCACATTA ATCAAGCTAT TCCAGAGAAT
GCGGCATATT ACCTGCATAA CTATGAAGGT TCGGATGATA TGCCAGCACA TATTAAAGCC
AGTGTATTTG GTAGCAACAT TACCATTCCT ATACAAAACG GAAGGTTAGC ACTGGGTACA
TGGCAAGGAA TATATTTGGG AGAGCATAGA AATCATGGTG GTGAGCGTAG CGTGATTGCA
ACAATTACCG GCCAATAA
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| Protein sequence | MTNSLPIWQQ FQLSLRAKPR GFHLITDEIG KQLEVLTTVN IGILHLFIQH TSASLTINEN
ADPTVRSDLE SHINQAIPEN AAYYLHNYEG SDDMPAHIKA SVFGSNITIP IQNGRLALGT
WQGIYLGEHR NHGGERSVIA TITGQ
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