Gene Patl_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0248 
Symbol 
ID4173995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp290341 
End bp290805 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID638053247 
ProductCheC-like protein 
Protein accessionYP_659834 
Protein GI109896579 
COG category[N] Cell motility 
COG ID[COG1406] Predicted inhibitor of MCP methylation, homolog of CheC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0557914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG AGTTTATAAA TCCGTTCATT GCCGCTTTAC GCAACGTTCT CAGTACCATG 
GCGCAATTAG AGTTGGTGCC AGGCAAGCCA CAGAAGAAAA CGGATTCTGC GGCGAAAGGT
GATGTGTCAG GTTTAATTGG TATGGTTGGT GACGATGTAA AAGGGTCACT GTCAATTACT
TTTGAAACCA GCATTGCGCT TAAAGTTATG CATAATATGC TCGGAGAGCA ACTAGAATCG
GTCAATGAAG ACGTGGCCGA TATGGTTGGT GAAATCACCA ATATGATTTG TGGTGGTGCA
AAAAACGAAT TAGCTAAACT TGGTTACAAT TTTGGTATGG CAACACCGGT TGTAGTTTTC
GGTAAAAATC ATACACTAAG TCACACGGCA TCTGGTCGTA AATTGATCAT GCCATTCGCT
AATGAACACG GCAAAGTGTA TTTAGAGATG TGTTTTGACA AATAG
 
Protein sequence
MNAEFINPFI AALRNVLSTM AQLELVPGKP QKKTDSAAKG DVSGLIGMVG DDVKGSLSIT 
FETSIALKVM HNMLGEQLES VNEDVADMVG EITNMICGGA KNELAKLGYN FGMATPVVVF
GKNHTLSHTA SGRKLIMPFA NEHGKVYLEM CFDK