Gene Patl_0234 details

Gene Information

• Locus tag: Patl_0234
• ID: 4171721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 278186
• End bp: 278626
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053233
• Product: general secretion pathway protein G
• Protein accession: YP_659820
• Protein GI: 109896565
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGT TACAACGTAC ACAGCGCGGC TTTAGCTTGA TTGAAGTCAT GGTCGTTCTA 
CTAATTATCG GCATTATGGC ATCGATGATC GCCCCGTCTA TTTTAGGTAA TCAAGAACAA 
GCGCAACTGA AAAAAGCGGC AGTGGATATT CAGCAGCTTG AAAGCGCACT AGAAATGTAC 
AAGCTGCGTA ATAACGTGTT TCCTACCAGT GAACAAGGCC TTGATGCCCT AGTTACCATT 
CCTACCATCG ATCCCATTCC TCGTAATTAT CAAGACGGTG GATTCATCAA GCGTTTACCT 
GAGGACCCTT GGGGCAATCC CTATCAGCTA ATTAGCCCAG GGGAAGTCGG GGTGATTGAT 
ATTTTCTCAA ATGGACCTGA TGGCGAAGCC GGCACTGATG ATGATATTGG TAACTGGAAC 
CTTAATGACT ATTTAGGCTA G 

 

Protein sequence

MKTLQRTQRG FSLIEVMVVL LIIGIMASMI APSILGNQEQ AQLKKAAVDI QQLESALEMY 
KLRNNVFPTS EQGLDALVTI PTIDPIPRNY QDGGFIKRLP EDPWGNPYQL ISPGEVGVID 
IFSNGPDGEA GTDDDIGNWN LNDYLG