| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0230 |
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| Symbol | |
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| ID | 4171717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 272455 |
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| End bp | 273309 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053229 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_659816 |
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| Protein GI | 109896561 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGTAT TAGTGATTTT CTTATTAGCC TATTTAGCCG AGTTGACCTG GCGCTTATGG
CCCAAAAGCG AATTGGCACA TAATGATGCG CCATTAACGC GTCTTGCCCC GATAGCCTCA
GGCAATAATT CCACTCTCAA TTTAAACGCC GTAAAACGAC TTAATTTATT TGGCGATTTT
CAAGCCTCTC CTGTGGCTGA GCAAACCGTT ACTGATGCAC CTGAAACAAA ATTAAACCTG
ACACTGACTG GTGTAGTCAC CAGCTCAGTG CAAGAGCAAG GTGCCGCTAT TATTGAAAAC
CGAGGTAGTC AAGACACCTA CGGCCTAGGC GAAAAGATCA TTGGCACCAA TGCTACGTTA
CGTGAAGTGT TTCGTGACCG AGTCATTATC CGTAATGGTG TGGTAAATGA GACCCTTATG
TTAGATGGTG TTGATTTTGA TGAAGCCAAT AAAAAACGCA CGATTACCCC TCGTCGTCCT
GCACCTGCAA TTTCTCCCTC GCCGATACAA GATAACGTGA TTACTTTATC TGATGACGTG
ATAGATGCCA CGCGTATGCT TCAGCAGCAA CCTGCTAATT TTACTGAGTT TATCTCGGTC
GCTCCCCATA GCGCCGATGG TGAGTTACAA GGCTATCGCG TCAGTCCAGG TAAAAAGCCT
GCACTGTTTA AAGCGGCAGG TTTGCAAAAT GGTGATGTCA TTACTGATAT CAATGGTTTG
AATTTAACCG ATCCTCAGCA AGCTGTTGAG GCCATGGGCG AATTGCGCGG TGCGCAATCC
TTACAAATTA CCGTCAGCCG AGACAACGAT TTGCTGACCT TGTTTTTAGA ATTACCCGAT
GCGGAACAGG AATAA
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| Protein sequence | MAVLVIFLLA YLAELTWRLW PKSELAHNDA PLTRLAPIAS GNNSTLNLNA VKRLNLFGDF
QASPVAEQTV TDAPETKLNL TLTGVVTSSV QEQGAAIIEN RGSQDTYGLG EKIIGTNATL
REVFRDRVII RNGVVNETLM LDGVDFDEAN KKRTITPRRP APAISPSPIQ DNVITLSDDV
IDATRMLQQQ PANFTEFISV APHSADGELQ GYRVSPGKKP ALFKAAGLQN GDVITDINGL
NLTDPQQAVE AMGELRGAQS LQITVSRDND LLTLFLELPD AEQE
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