Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0227 |
Symbol | hslO |
ID | 4171714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 270114 |
End bp | 271007 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053226 |
Product | Hsp33-like chaperonin |
Protein accession | YP_659813 |
Protein GI | 109896558 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTG ACCAATTGCA TCGTTACCTT TTCAATCAAG CTCATGTGCG TGGTGAGCTC GTTAGATTAG AAAACAGCTA CCAATCTATT TTGGATTCTT ACGCTTACCC ACCCGTCATC CAGAAACTAC TTGGTGAATT AATGGCAGCC ACATCACTAC TGACTGCCAC ATTGAAATTT GAAGGGGATA TTGCCCTGCA ATTACAAAGC GATGGCCCGG TAAACTACGC CGTTATCAAC GGTACTCATG ATCAGCAGTT ACGTGGCGTA GCGCGATGGG ATGAGTCGTT GGCTGAATTA CCTACTGACT TTAGTCAGCT GTTTACAAAA GGTATTTTAG TGATCACTAT CACCCCTGAA GACGGTGAGC GTTATCAAGG AATGGTGGCG TTAGATAAAC CGACCTTAGC AGAATGCATT GAGAGCTATT TTCAACAATC AGAGCAACTT GCGACCAAAG TCATTTTGCG CACCCAACAG ACGGATAGCG GCGCAAAGGC CTGTGGCATG TTCTTGCAAA TTTTGCCCAC CAGCAGTCAG GCGACAGCAA CCACCGACAC CGGATTCGAG CATTTAGCGA AGCTGACTGA AACCATTAAA AATGAAGAAC TGTTTAGCTT ACCCGCTGAA GATATTCTTT ATCGCCTTTA CCATCAGGAA GAGATTGAAG TTTACCCGCC AGCTGACATT ATTTTTAAAT GCAGTTGCAG CCGAGAACGT AGCGCGAATG CATTAGCTGC AGTGGAAAAA GCGGAATTAT TGGATATTGT TGCCACTGAA GGCGCTATCA AAATGAACTG CCAATATTGT CATCGTGAGT ATCGCTTTGA TGAAATTGAC GTACACGCAA TTCACGCGGG CACGTTTGCG ATGGACACTC AAAACGACCA ATAA
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Protein sequence | MSFDQLHRYL FNQAHVRGEL VRLENSYQSI LDSYAYPPVI QKLLGELMAA TSLLTATLKF EGDIALQLQS DGPVNYAVIN GTHDQQLRGV ARWDESLAEL PTDFSQLFTK GILVITITPE DGERYQGMVA LDKPTLAECI ESYFQQSEQL ATKVILRTQQ TDSGAKACGM FLQILPTSSQ ATATTDTGFE HLAKLTETIK NEELFSLPAE DILYRLYHQE EIEVYPPADI IFKCSCSRER SANALAAVEK AELLDIVATE GAIKMNCQYC HREYRFDEID VHAIHAGTFA MDTQNDQ
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