| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0217 |
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| Symbol | |
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| ID | 4171763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 259847 |
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| End bp | 261346 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053216 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_659803 |
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| Protein GI | 109896548 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCT GCTTCTATCA ACGTTTAGCA ATTTCACTGG TGGCGGTATT TATGCTGGTC
ATGATTGCCT GCTTTTACTC CACTAATGAA TTGCAAAAAC TAACCCAACA AGAAGCAGAA
CAAAAACTAC ACATAGGCTT GGCCGAGCAC CTAGTGCGCG ACAACCCACT GTTAAAAGAA
GGCGTATATG ACTATGACGC GTTAGGAAAC CTCTTCCATT CTCTGATGAT ACTGGGGCCA
AACTTTGAGT TTTACTACCT GGACCCGCAA GGGAAAATAC TCACCTATTC GGCGAAACCT
GGCAAAGTAA AAGCCACATC AGTGGATATT GCCCCGATTA AGCATTTGAT TGGCGACAAT
CGGAGCTTTC CTGTTGAAGG AGATGATCCT AGGCAACTTG GGCGTCATAA AATTTTCTCC
GCTGCACCTG TCTATAACGA TGACAAACTA CAAGGTTATT TGTATGTCAT CATTGGCGGC
GAGCGTTATG ACTCCATTCT GGCGAGTTTA AAGAACAGCC AAAGCATGCG TGAAATTGCT
ATATTCTTGG TGGTCGGTTT AATGCTGTTG CTAATCGCAT TGCTGGTCAT GTTCAAGTAT
TTTACCACGC CATTGAGGCG CCTAAGTGAC GACATGGAAA AGGTGCGTGA AGCTGATTTT
CATCGTGAAC AGGTACCCCG GGATTTAGCC GTGTGGAATA AAAACAGCCA CAACGAAGTT
GACCGACTCG GCTGTGCATT CACCGATATG CTGACGCATA TCGATCACCA GTTCGAACAG
CTAAGTAAAA TAGACACCCA GCGTCGTGTA CTTTTAGCCG ATTTATCCCA TGATTTGCGC
ACACCGCTGG CCAGTTTGCA GGGTTATATT GAAACCCTAG CGTTAAATGG TGAGAGCTTA
TCCAAACAAG ACCGAGAGCA TTTCGTTGAT GTGTCCCTTA AAAATGCTAA AAACCTTAAA
CACCTTATTG ACCAAATATT CGAGCTCGCT TATTTAGAAG GCGGGCAAGT CACCTTGCAT
CAAGAGCCAT TCCCTCTTGG GGAGCTACTT CATGATGTGG CGGCCAAGTT CGCCTTAGAA
GCGCAAAGCA AAAACATAAA GATCCGCGTC ATCCCTAATC ATTTCGAGTA TCACGTGTTT
GCAGACATAG GTAAATTGGA AAGGGTGCTG ACCAACCTAA TCGCAAACGC CATTCGCCAT
ACCCCTGAAC AAGGCAAAAT AGATTTAGCT GTTGCGATAC ACAACGACAA ACTCAGGGTG
GATATTCGCG ATACTGGCGT TGGTATCAGT GACAAAGAAA TCGCTTTTAT TTTTGATGCG
CGATACCAAG CAAGTAACAC CGAAAAAGAC ACCTGCAGCC ACGCTGGTTT AGGCTTAGCC
ATTTGTCAAA AACTAATGGC GCTGCTCAAT TCAGACTTAA CGGTTGAAAG CAAACTGGGC
AAAGGCACCT GCTTTAGCTT TGAGTTAACG CTGGTAAACA GCCATGCATT AGCCCATTAG
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| Protein sequence | MKICFYQRLA ISLVAVFMLV MIACFYSTNE LQKLTQQEAE QKLHIGLAEH LVRDNPLLKE
GVYDYDALGN LFHSLMILGP NFEFYYLDPQ GKILTYSAKP GKVKATSVDI APIKHLIGDN
RSFPVEGDDP RQLGRHKIFS AAPVYNDDKL QGYLYVIIGG ERYDSILASL KNSQSMREIA
IFLVVGLMLL LIALLVMFKY FTTPLRRLSD DMEKVREADF HREQVPRDLA VWNKNSHNEV
DRLGCAFTDM LTHIDHQFEQ LSKIDTQRRV LLADLSHDLR TPLASLQGYI ETLALNGESL
SKQDREHFVD VSLKNAKNLK HLIDQIFELA YLEGGQVTLH QEPFPLGELL HDVAAKFALE
AQSKNIKIRV IPNHFEYHVF ADIGKLERVL TNLIANAIRH TPEQGKIDLA VAIHNDKLRV
DIRDTGVGIS DKEIAFIFDA RYQASNTEKD TCSHAGLGLA ICQKLMALLN SDLTVESKLG
KGTCFSFELT LVNSHALAH
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