Gene Patl_0213 details

Gene Information

• Locus tag: Patl_0213
• ID: 4171759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 256999
• End bp: 257700
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053212
• Product: hypothetical protein
• Protein accession: YP_659799
• Protein GI: 109896544
• COG category: [S] Function unknown
• COG ID: [COG1284] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTCCT CAACACATCG ATTTTACGAA GATGTACTGG CCATCTTAAG CGGTACGGTC 
TTCGTTAGCT TAGGTTTAGC CATCTTTAAA GCGTTAGGTT TATTGATTGG TGGTACGGCA 
GGTATTGCGC TACTGCTGAG CCAATTTGTG CCGGTTAATT TTGGTTTACT GTTTTTTCTT 
GTGAACTTGC CGTTTTATTA CATTGCGCTG AAACAGTTAG GCTGGCGCTT TACCTTGAAT 
ACCTTTGTGA CCATTTCACT GGTGTCTTTG CTGGTGGAAA ACATGCACTT GTTTATATCC 
TTGAGTGACA TTCAGCCGGT TTTTGGTGCC GTTGTGGGGG GAATGCTAAT TGGTATGGGC 
ATGCTGATTT TATTCCGGCA CAAATCCAGT TTAGGCGGCT TGGGTATCTT AGCGTTTTAT 
TTACAAGGCA GTAGAGGCAT TCGCGCTGGC ACGTTTCAAC TGGTGGTAGA TAGCCTGATT 
GTGGTCGGGG CGTTATTCAT TATGAACCCG ATTTTATTGG CCATTTCATT GGCAGGTATG 
GTGACGACCA ACGTAATACT TGCGGTGAAT CATAAACCCG GGCGTTATCA CAGTAACTAT 
GCAGAGACCA TGGCCGAGTT AACCTCAGAA CCGGCTCAGG AAGCTAAAAC TATCCAACAA 
ATCAACACTG CTAAGGTTTC TGATCAACCG GCGAACAGCT GA 

 

Protein sequence

MHSSTHRFYE DVLAILSGTV FVSLGLAIFK ALGLLIGGTA GIALLLSQFV PVNFGLLFFL 
VNLPFYYIAL KQLGWRFTLN TFVTISLVSL LVENMHLFIS LSDIQPVFGA VVGGMLIGMG 
MLILFRHKSS LGGLGILAFY LQGSRGIRAG TFQLVVDSLI VVGALFIMNP ILLAISLAGM 
VTTNVILAVN HKPGRYHSNY AETMAELTSE PAQEAKTIQQ INTAKVSDQP ANS