Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0210 |
Symbol | |
ID | 4171756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 253297 |
End bp | 254175 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638053209 |
Product | hypothetical protein |
Protein accession | YP_659796 |
Protein GI | 109896541 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0778377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA ACCCAAGAGA TTTTAAAGCA CCCCAGGGGG AGTTATGTGA TTTGAGCCAG CGACCCACCG CTGTTGCCCC TTTGTATACG TCCAAAGTGC ATTATAAACA GAAGCTCAAA AAGCAAATCG GTAAAATGAG TGATTTGCAG CGCATGTTAT ACGCTGCTAA TGAGCATTCG GTGTTGATCA TTTTTCAGGC CATGGACGCA GCGGGTAAAG ACAGCTCAAT TCGTCATGTC ATGTCGGGTA TTAACCCTCA AGGTTGCCAA GTACATAGCT TCAAACACCC TAGTCAGAAT GAGCTAGAGC ACGATTTTTT GTGGCGTTCG AACCTAGCGT TACCGGAGCG AGGACGTATC GGGATTTTCA ATCGCTCATA CTATGAAGAA GTGCTAATTG CCCGTGTGCA TCCTGAAATT TTGCACAGCC AACACATCCC TGATGAAGCA ATGCACAAAG AGCATATATG GCGCGAACGT TTCCGCTCGA TCAATGATTT AGAGCAGCAC TTGACGCGAA ATGGTACGCG CATCATTAAG TTCTTTTTGC ATTTGTCTAA AGAAGAGCAG CGCAAGCGCT TTCTAGCCCG TATTGATAAC CCAGATAAAA ACTGGAAATT CAGCGATGCC GATATTCAAG AGCGGGAGTT TTGGCCGCAG TATATGCACG CCTACGAAGA TTGTATTGGC TCCACTAGCA GCAAAGAGGC CCCTTGGTAT GTGATCCCAG CGGATGACAA GCGTAACGCA CGCCTGATCA TCGCCAAAAC CATAGTCGAA ACCTTCGAAT CATTGGATAT GCATTACCCA GAAGTGGATG AGCAGCGCAA ACAAGAATTG CAACGTATGC GCGGGTTGTT AGTGGCGCAA GCCAAATAA
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Protein sequence | MKVNPRDFKA PQGELCDLSQ RPTAVAPLYT SKVHYKQKLK KQIGKMSDLQ RMLYAANEHS VLIIFQAMDA AGKDSSIRHV MSGINPQGCQ VHSFKHPSQN ELEHDFLWRS NLALPERGRI GIFNRSYYEE VLIARVHPEI LHSQHIPDEA MHKEHIWRER FRSINDLEQH LTRNGTRIIK FFLHLSKEEQ RKRFLARIDN PDKNWKFSDA DIQEREFWPQ YMHAYEDCIG STSSKEAPWY VIPADDKRNA RLIIAKTIVE TFESLDMHYP EVDEQRKQEL QRMRGLLVAQ AK
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