Gene Patl_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0210 
Symbol 
ID4171756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp253297 
End bp254175 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content47% 
IMG OID638053209 
Producthypothetical protein 
Protein accessionYP_659796 
Protein GI109896541 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0778377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA ACCCAAGAGA TTTTAAAGCA CCCCAGGGGG AGTTATGTGA TTTGAGCCAG 
CGACCCACCG CTGTTGCCCC TTTGTATACG TCCAAAGTGC ATTATAAACA GAAGCTCAAA
AAGCAAATCG GTAAAATGAG TGATTTGCAG CGCATGTTAT ACGCTGCTAA TGAGCATTCG
GTGTTGATCA TTTTTCAGGC CATGGACGCA GCGGGTAAAG ACAGCTCAAT TCGTCATGTC
ATGTCGGGTA TTAACCCTCA AGGTTGCCAA GTACATAGCT TCAAACACCC TAGTCAGAAT
GAGCTAGAGC ACGATTTTTT GTGGCGTTCG AACCTAGCGT TACCGGAGCG AGGACGTATC
GGGATTTTCA ATCGCTCATA CTATGAAGAA GTGCTAATTG CCCGTGTGCA TCCTGAAATT
TTGCACAGCC AACACATCCC TGATGAAGCA ATGCACAAAG AGCATATATG GCGCGAACGT
TTCCGCTCGA TCAATGATTT AGAGCAGCAC TTGACGCGAA ATGGTACGCG CATCATTAAG
TTCTTTTTGC ATTTGTCTAA AGAAGAGCAG CGCAAGCGCT TTCTAGCCCG TATTGATAAC
CCAGATAAAA ACTGGAAATT CAGCGATGCC GATATTCAAG AGCGGGAGTT TTGGCCGCAG
TATATGCACG CCTACGAAGA TTGTATTGGC TCCACTAGCA GCAAAGAGGC CCCTTGGTAT
GTGATCCCAG CGGATGACAA GCGTAACGCA CGCCTGATCA TCGCCAAAAC CATAGTCGAA
ACCTTCGAAT CATTGGATAT GCATTACCCA GAAGTGGATG AGCAGCGCAA ACAAGAATTG
CAACGTATGC GCGGGTTGTT AGTGGCGCAA GCCAAATAA
 
Protein sequence
MKVNPRDFKA PQGELCDLSQ RPTAVAPLYT SKVHYKQKLK KQIGKMSDLQ RMLYAANEHS 
VLIIFQAMDA AGKDSSIRHV MSGINPQGCQ VHSFKHPSQN ELEHDFLWRS NLALPERGRI
GIFNRSYYEE VLIARVHPEI LHSQHIPDEA MHKEHIWRER FRSINDLEQH LTRNGTRIIK
FFLHLSKEEQ RKRFLARIDN PDKNWKFSDA DIQEREFWPQ YMHAYEDCIG STSSKEAPWY
VIPADDKRNA RLIIAKTIVE TFESLDMHYP EVDEQRKQEL QRMRGLLVAQ AK