| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0197 |
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| Symbol | |
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| ID | 4171743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 235224 |
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| End bp | 235679 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053196 |
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| Product | hypothetical protein |
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| Protein accession | YP_659783 |
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| Protein GI | 109896528 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTGGC TAAGCGATAA TTTAGGCATA GGCTTAATCA GCCTTGGCCT TTTGCTGTTA
GCAATTGAAA TTCTGGTGCT GGGGTTTTCC ACTTTTGTGC TGTTTTTTGT GGGCTGTGCT
GCCGTTATAA CGGGCATTTT AATTCAATTT GGTATTGTGG CGGATACCGC CCTCAACGCG
ACCTTGTTTG TGTCGTTGAT TACAGCAGTG CTCGCGGTAT TTTTATGGAA ACCCCTTAAA
AATATGCAAA AAGACGTGGA TCCCAAAAAA GCCAGTAATG ACCTGATTGG CCACAGCTTT
ATACTTGCCA CAGACACCAG CGCTGAACAA CCGGCGATTT ACCACTTTTC GGGGATAGAT
TGGCGCTTAG TCAGCGAGCA CCCCATCACC AGCGGCACCA AAGTTGAGGT CATTGCTGTG
GATGTAGGGC AATTTACTAT TGCCCCCTGC GCCTAG
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| Protein sequence | MMWLSDNLGI GLISLGLLLL AIEILVLGFS TFVLFFVGCA AVITGILIQF GIVADTALNA
TLFVSLITAV LAVFLWKPLK NMQKDVDPKK ASNDLIGHSF ILATDTSAEQ PAIYHFSGID
WRLVSEHPIT SGTKVEVIAV DVGQFTIAPC A
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