| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0187 |
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| Symbol | |
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| ID | 4171733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 219094 |
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| End bp | 220557 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053186 |
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| Product | ribonuclease G |
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| Protein accession | YP_659773 |
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| Protein GI | 109896518 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTG AACTATTAAT TAATGTTACC CCTTCTGAGT CTCGCGTGGC CCTTATCGAA
AATGGTATTT TGCAAGAGGT TCACATTGAA CGTCATACCA AGCGTGGCTT GGTAGGCAAT
ATATATCGCG GTAAAGTCAG TAGAGTCTTG CCGGGTATGC AAGCCGCTTT TGTAGATATC
GGCTTAGACA AAGCTGCCTT TTTACACGCT TCGGATATTG CCATTCATAG CGAAGTAGAA
GATGAAGTGT CATCGAGCCA CCTAGAAAAA CGTGACATAC GTGAGCTTGT GCGTGATGGT
CAGAATATTG TGGTGCAGGT CGTCAAAGAT CAAATAGGCA CGAAGGGCGC ACGTTTAACC
ACAGATATCA CTATTCCATC AAGGTATTTG GTGTTCATGC CTAGCGTTGA GCATGTGGGT
GTCTCCCAGC GTATTGAAGA TGAAGCCGAG CGAGAGCGTT TAAAGAGCTT GGTACAAGAA
TATTGTAGTG AAAATGGCGG CTTTATTTTA CGTACTGCTG CCGAAGGCGT GAAAGCCCAA
GAGCTGCGCC AAGACGCTGA TTTTTTGCGT CGTCTATGGG AAAAGATCCG TTCACGGATG
AAAAAGAAAA CCCATATATT ATATGAAGAT TTGCCCCTAG CACGACGCGT GTTACGTGAT
TTTGTCGGGA CTGAGCTTGA CCGAATTCGT ATTGATTCTA AATTGTCTTT TCATGAGTTA
CAGCAGTTTA CCCGTGAGTA TGTGCCCGAG CTACACCGCT TATTAGAGTA CTACCCAGGG
GATCGACCTA TTTTCGATTT ATACGACGTT GAGAACGAAT CGCAGCGCTC TTTAGAGCGA
CGGGTCGATT TGAAATCGGG TGGTTATATT ATCATCGATC AGACCGAAGC CATGACCACC
ATCGATATCA ACACTGGAGC ATTTGTTGGG CACCGTAATT TAGAAGAAAC CATATTTAAC
ACTAATATTG AGGCCACCTC TGCGATTGCG CGTCAGCTTC GTTTGCGCAA CCTTGGCGGG
ATGATCTTAA TCGACTTTAT TGATATGGCT GATGCTGATC ATAAGAGGCG CGTTATTCAC
AGCCTCGAAA GTGCAACCAG TAAAGACCGA GCTAAAATTA ATATTCACGG CTTTACCGCA
CTGGGTTTAA TCGAAATGAC TCGAAAAAGA ACACGGGAAA GTTTGGAACA TATTCTGTGT
GGTGAATGTC CAGTATGTAA GGGACGCGGT TCGGTAAAAA CAGTAGAAAC CGTGTGTTTT
GAAATCATGC GTGAAATTGT TCGAGTGAAT CGTGCCTATG ATGCAGACAA ATTTGTCGTT
TATGCGGCAC CGTCTGTGGT CGAAGCCTTG TTAGGCGAAG AATCACACAT GCTCGCTGAG
CTTGAAGTCT TTGTTTCTAA ACAAATAAAG GTGCATACAG AGTTGCTATA CAACCAAGAT
AAATACGATG TGGTAATGAT GTGA
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| Protein sequence | MSAELLINVT PSESRVALIE NGILQEVHIE RHTKRGLVGN IYRGKVSRVL PGMQAAFVDI
GLDKAAFLHA SDIAIHSEVE DEVSSSHLEK RDIRELVRDG QNIVVQVVKD QIGTKGARLT
TDITIPSRYL VFMPSVEHVG VSQRIEDEAE RERLKSLVQE YCSENGGFIL RTAAEGVKAQ
ELRQDADFLR RLWEKIRSRM KKKTHILYED LPLARRVLRD FVGTELDRIR IDSKLSFHEL
QQFTREYVPE LHRLLEYYPG DRPIFDLYDV ENESQRSLER RVDLKSGGYI IIDQTEAMTT
IDINTGAFVG HRNLEETIFN TNIEATSAIA RQLRLRNLGG MILIDFIDMA DADHKRRVIH
SLESATSKDR AKINIHGFTA LGLIEMTRKR TRESLEHILC GECPVCKGRG SVKTVETVCF
EIMREIVRVN RAYDADKFVV YAAPSVVEAL LGEESHMLAE LEVFVSKQIK VHTELLYNQD
KYDVVMM
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