| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0184 |
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| Symbol | |
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| ID | 4171730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 217173 |
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| End bp | 218033 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053183 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_659770 |
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| Protein GI | 109896515 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00341566 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTCGA TTTTTCTGCG TGGTCCATCG TTACACATTA AACTGGTTTT TGCCCTTGCG
CTATCAGCCG GATTAATCGT GTTTGATCAT GTCTTTGATG GCTTCGCCAC AACCCGTGTT
TACCTCAACT CTGTGGTCAG CCCCATTCAA TATCTAGCTA ACTTACCTAG CGAAATGCTC
AACGCCAGTG CTAGTCGTTT GGTGTCGCAT CAGCAATTAC TTGAAGAAAA TGCTGAGCTA
CAACACGATG CCGTTGTGCT TAATGGCAAG TTGCAGCGTT TTGTTTTGCT GCAAGAAGAA
AACGACCGCT TACGCCGTCT TCTGAACACC CCAGTGCGCG GCGATATTCG TAAAGAAGTG
GCAGAATTAA TGGCGGTAGA TAACAACCCT TATAGTCACC AAATCGTTAT TGACCGCGGT
GCCATTCAAG GGGTGTATGA AGGCCAACCC GTTATTGATG ATAAAGGGAT CGTAGGACAA
ATTATGCAGG TCGGTTCGAC CAACAGCCGC GTATTGCTGA TTTCGGACGT GACTCATGCC
ATTCCTGTGC GTGTTGCCAG AAACAACATA CGCATGATTG CTTCGGGCTC AGGGAGCTTA
AACGAGTTAA TCATTCAGCA TGTTCCCCAC AGCGCTGATA TTGAAGAAGG CGATTTGCTG
CTTTCATCTG GTTTGGGCAA TGTATTTCCT GAAGGCTATC CGGTGGCAAG AATTACCTCG
ATTGTCCGCG ATGAAGGACG CCCTTTTGCT CAGGTCAATG CTGAGCCAGT GGCGCTGCTG
GATCGTCTGA AATACTTACT CTTGTTGTGG CCAAATAATC TTGTAGGGCC AGAGCAGTCT
GTTCCGGATG CAGAACAATG A
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| Protein sequence | MNSIFLRGPS LHIKLVFALA LSAGLIVFDH VFDGFATTRV YLNSVVSPIQ YLANLPSEML
NASASRLVSH QQLLEENAEL QHDAVVLNGK LQRFVLLQEE NDRLRRLLNT PVRGDIRKEV
AELMAVDNNP YSHQIVIDRG AIQGVYEGQP VIDDKGIVGQ IMQVGSTNSR VLLISDVTHA
IPVRVARNNI RMIASGSGSL NELIIQHVPH SADIEEGDLL LSSGLGNVFP EGYPVARITS
IVRDEGRPFA QVNAEPVALL DRLKYLLLLW PNNLVGPEQS VPDAEQ
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