Gene Patl_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0183 
Symbol 
ID4171729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp216079 
End bp217122 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID638053182 
Productrod shape-determining protein MreB 
Protein accessionYP_659769 
Protein GI109896514 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000147765 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAA AGCTTCGAGG AATGTTTTCC AACGACTTAT CTATTGACCT CGGTACAGCA 
AATACGCTTA TCTATATAAA GGATCAGGGA ATTGTACTAA ATGAGCCTTC CGTTGTTGCT
ATTCGGCAAG AGCGTGCAGG TGGTCCTAAA AGTGTAGCGG CTGTCGGTGG TGAAGCAAAA
CGGATGTTGG GACGTACTCC TGGCAACATA AAAGCCATCA GACCCATGAA AGACGGTGTT
ATTGCTGACT TTTATGTGAC TGAGAAAATG CTACAGCATT TTATCAAGCA AGTGCACGAC
AACAACTTTT TGCGCCCTAG CCCTCGCGTA CTCGTATGTG TACCTTGTGG TTCTACACAG
GTAGAACGTC GTGCGATCCG TGAGTCGGCA TTAGGTGCTG GCGCGCGTGA GGTTTATCTT
ATTGATGAGC CTATGGCAGC AGCGATTGGC GCGGGTTTAC CCGTATCAGA AGCGACCGGC
TCTATGGTAG TCGATATTGG TGGTGGTACT ACTGAGGTAG CGATCATCTC ATTGAACGGT
ATTGTTTACT CGTCATCGGT TCGTATCGGT GGTGATAAAT TCGATGAAGC CATTATCAGC
TATATTCGCC GTAACTTTGG TTCACTTATT GGTGAGGCCA CAGCCGAGCG TATTAAGCAC
GAGATTGGTG CTGCTTATCC TGGTGAAGAA GTGAAAGAAA TTGAAGTACG TGGCCGTAAC
TTAGCCGAAG GCGTACCTCG AGGTTTCACG CTTAACAGCA ATGAAATTCT AGAAGCGTTG
CAAGAACCAT TAAGTGGAAT TGTTTCTGCC GTTATGGTGG CGCTTGAGCA ATCTCCTCCT
GAACTTGCGT CTGATATTTC AGAACGGGGT ATGGTATTAA CAGGTGGTGG AGCTTTACTC
AAAGATTTAG ATCGCTTGTT AATGGAAGAA ACTGGCATAC CAGTAGTGAT TGCTGATGAT
CCTTTGACGT GCGTGGCACG AGGTGGTGGT AAAGCATTCG AGATGATCGA TTTGCACGGT
GGCGATTTAT TTAGCTACGA GTAA
 
Protein sequence
MFKKLRGMFS NDLSIDLGTA NTLIYIKDQG IVLNEPSVVA IRQERAGGPK SVAAVGGEAK 
RMLGRTPGNI KAIRPMKDGV IADFYVTEKM LQHFIKQVHD NNFLRPSPRV LVCVPCGSTQ
VERRAIRESA LGAGAREVYL IDEPMAAAIG AGLPVSEATG SMVVDIGGGT TEVAIISLNG
IVYSSSVRIG GDKFDEAIIS YIRRNFGSLI GEATAERIKH EIGAAYPGEE VKEIEVRGRN
LAEGVPRGFT LNSNEILEAL QEPLSGIVSA VMVALEQSPP ELASDISERG MVLTGGGALL
KDLDRLLMEE TGIPVVIADD PLTCVARGGG KAFEMIDLHG GDLFSYE