| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0182 |
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| Symbol | |
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| ID | 4174046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 211200 |
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| End bp | 215813 |
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| Gene Length | 4614 bp |
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| Protein Length | 1537 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053181 |
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| Product | CUB domain-containing protein |
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| Protein accession | YP_659768 |
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| Protein GI | 109896513 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.384689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGGA TAAGAGCAAT ACACAAACGT ATCGGCCGTT TTAATTCACT TATTTTGCTC
TTGATGTTGA ATATGCTCAG TTGTTCGCAG GTACTCGCCG ACACGCTATG TTCAGACACA
GAAACATCAC GTGCTCGCGG GGCGTTATTT GATTCCGGCG GGGCAAGTGG TAATTATGCC
AATAATGAGG ACTGTGAGTT TACTATTCGT GCTCCTCAGG GAGGGGCTAT TACGCTCAGC
TTTTCTGACT TTGATTACGA AGAAAACTAC GACTTTTTTT CTGTATATGA TGGTGAAAAT
GTCAGTGCGC CACTTTTAGG GACTTTCAGT GGCTCAAATC TTCCGTCTGT ATTGGTGGCT
ACCTCAGGCA CCATGTTTAT CGAGCATAGC ACAGATGGTT CAGCTGTAAG GCAAGGCTTA
GCGGCCACTT GGTCCATCAG TAGTAATAGT TGTAGTACCG AGACCTTCAA TATGGCTGAT
CATTTTCCAT CTGCCAGCTA CAGTGCTTCT TCGGGCTCTG CGCCTTGGAG CTCCGATTGG
CTAGAGGCAG GAGAGTCTGA TGGCCCGGCA CGCGGGTATT TGCGGGTTAA TAATTCACTT
TGTTCATCCG GTAACTGTTT GCGCTTAGGG GTTGTCGCAT CTGAAAACCC ACGTTCTTAT
AGCGCGCGAT TCGTGTACCG AAGGTTGAAC TTATCCGATG CCGTTACTGC TCAACTTAAT
TTTAATTACC GAGTCGGTCA CAATGCAGGT GAATCTTTAA TAAGGCTTGG CATCTCCACC
AACGGTGGCA GTACTTGGAC GAATTTGAAA GATTACACGA TCACCGCCAG CAACTTTTCT
AGTACAGCGC AAAGTTTCGA TATCAGTGCT TTTATCGGCA GTAATGTTGC TATTGGCTTT
CAGGTCAGTG GTACAAATTC TGAATCGGGC TTCTATGTGG ATGATATCAA CGTCAGTGCG
GCAAAGGCGG AAGTCTGTGA CGGCCCGGCG ATAGCTTTTT ACCAGTTCGA ACAAGAAGAG
TGGGCGACAA CGAACAGCGT TATTGATTCT TCAGCGTCAG GATATGATGC ATCACCCTTG
GGGGATGCAT TTCCAACATT TCCTAGTATT CAAACGTCTT GCCAAGTGAT GAGTGTTCCG
AAAAATTCTG ATGCAAATAT TAGCGCGGGC ATAGACACTG AGCTTAGAGT AGACACCGAT
ATCGGCGACA AGGGCACAAT ATCGTTTTGG TATCGCAGTG CATTGGCGTG GAGCAATGGG
AGGGGAAGGC AGCTTTTTGA TGCTTCGACT TGGATAGGCA ATGCAAACTC TAAATATTTT
AATCTTAGCC TACGCAATGG GACTTTACGT TTTGGCCTAG AGGACACTAC CGATAATGAT
GCTGCTGCCA GTGTGAGTGG GTTAACCTTT GCCCCTTATG AGTGGGTGCA TATTGCAGTG
ACTTATGATT ACAGCAAAGA TAGCGCTGTA ATTTTTATCA ACGGCCGTCA AGCCAGTCAA
ACATCAGACC TGGGACTGAA TGGTGACATG CCAGTCTTGG ACACGTTATA CATAGGAGAT
AACCGCAGTC TATACAATTT TGCCGATTCG CCGGCTAACT CTGCAGACGG TGAATTCGAT
GACGTACGTA TCTACGATTA CGCGCAAAGT CAAAGTCAGG TCAATACAGA CCTAGACAAT
GTCTCACCTT GTGCTGTGGC TCCTGTTGCG ATTTACGAGT TTGAGCAGGT GGAATTTAAT
GGCAGTCAAA GCATATTAGA TAGCACAAGT AACCAGCGCC ATGCATCGCC TTTGGGTGAA
GTGGTTTCTG TGTTATCAAC GGCCCAGGTT TCCTGCCGAT TTGCGGATGT GCCAATGAAC
ACAGATGCAA CGGTAATAGA TACTATTGAT AGCGGATTCT CACCGAATGA TATTGGCCAA
GCCGGGACCA TATCCTTTTG GTATCGCAGT AACGAAGATT GGTCGAGTAA CAATGCACGG
CAGTTATTCG ACGCCTCTAC CGATGCTGGA AACTCTAATT CAACCGCTAA GTATTTTTAT
TTAAGCCTAC GTGCATCCAC CTTGTATTTT GGTTTAGAGG ATATTGATGA TAGGGACGCC
GAAGCTATTG TTTCCGGGTT AAATTTTTCT GCAGGTGAGT GGGTACATGT AGCCGTGGGC
TATGACTATG CGGCAAAAAC AGCCGTTATT CATATTAATG GGGCTGAAGC GGGCAGATCG
AATAGTTTAA ATTTGAATAA CAACATCGCC CAATTTAACA CATTGTATTT TGGTGATAAC
CGCTCGGACT ATATTGTAAC GAACATGACA GCGAACTCCG CCAACGGCCA GTTTGATAAT
ATTCGTGTGA ATGCTTATGT GCAAAACAGC ACAGAAATTA CACAGGACAT GAACGCAATC
GCCACATGCC AATCTATCCA TCACTATCAA TTGGAGCATG ATGGTCAAGG ATTAACCTGT
GAAACAGAAA ACATCTCTAT AAAAGCCTGT GCAGACGAGA ATTGCACCCA ATTGTATACC
GAAACAAGCA GCGTAGAGTT AGCTCCAGAT GGTTGGAGGG CTGGGAACCC ATTGGTGTTT
ACTGGCGAAA TTATCAATAC ACCTCTGGCA GTGTTAGAGC CTGAATTAGC AACATTAGAC
ATAGTGCGTG CTAATCCCTC TGCGCCTTTA CGCTGCCTAA ATACTGGGTC AGGCATAGAA
AGCTGCGACA TCAATTTCGT CGATGCGGGA TTTGAGTTTA TCGGTGAACA AGTGACGGAT
AAGTTTTTGC CTGATCAGTT GTCACAAGCT AATTTTGTTG GGGCAAATTT GCGCGCAGTT
CAAAACGATA ACGGCGTGTG CAAAGCATTA TTACAAGGGC AACAAGATGT CACTTTCGGG
GTGAATTGTG TTTCGCCAAA TCGTTGTTTA ACTGATTTTA GCGGTATCGA TGTGAGTGCT
TCCCCAGATG GTGAATCCAC GGGTATTGTC TCTCTTACTT TTGACGCTGA CGGCGTGGCA
TCATTGGGAG CGTTTAATTA CGCGGATGCC GGGCGAGTGG CATTGCGAGC CGCCGCTGAA
ATAAATGGGG TCTCTATTAC CTCAGGTGAT GCCAGTGTGG ATATCGCCCC CACAAAATTA
ACCTTGGCGG TTGCGCCGCC AGCCCTTATT TATACCGACA CTGATTTCAG TGTTTATCCG
TCAAGTGCGG ACACAGACGT TTACCCTGCA GGCGAAGAAT TTACTTTTAA TATTACCGCC
TATGGGGTCT TAGGGGATAT CGCGTTACCT AATTATCAGC CAAGCACATT ACAAATAGCG
GTTGAGCGTA TACTGCCATT TGAATCAAGC GCAGCTGAGG GCACATTAGT CTTTGGTGAC
GGCGCTAGTG TGTTGGGTAA TGTAAATAAG CAGTTCGCAG ACACACCTGA GTTAACCTTC
GTCGAGGGGC AATACAATTA TCAGGCAACC TTCAGTGAAG TGGGGGTTAT TCGCCTAGAT
ATTCGGGATA TCGACTACCT GAGTGATAAC AACAATCCGA CAAGTGTCAT CAATAGCCAA
GATCCTATTA CTCTAGGGGA GTTCACCCCA GCATACTTTG ACGTTCAGGT GTCAACCGCG
CCGGAGTTAG TCAATCAATG TGGTAACTTC ACTTATATGG GTCAACCGAT TTCTTTTTCG
CCGACCACTC AAGTTGAATT AATTGCGATG AATGCCTTGG GGGAAGCCAC CAAAAATTTC
ATCAACGGCT ATTGGCGTTA TAACCCAGAT ACCGCAGCAG CTGTAGTGAT AGACGATGCC
TCGGTTCATG CTGGCGCGAG CCCAGCGGTG ACGCGCATTA CCGGTGCCGC TTCAGCCACG
ATCACCGCGC CCAGTGCGTT CACTGGCATC ACCCTAATAG ACGTGCCTGA TGGCACATTT
ACCTATGAAA AAGTAGCTAC GGACTTTGCC GCTTACCCTT TGATAGAGCC TTTCGTCGCC
GCTGTGGACA TGACGTTTTT AGCAACGTTT TTAAGCGGGG ATAATAATGT GTGTTATCAA
AGCGATTACC CGGTTTCAGG ATGTGAAGGA TTTCGCATTA GTGATGCAAC AGGCAGTAAT
ATTACGGGAG TAGACGTCAA TGTTCGCCAT GGGCGTCTGG CGCTTGGGCC TAACTTTGGC
CCTGAACCGG ATTTTTTAGT TACCCCTGTA AGCGCAGAGC ATTATCTAAA TGGCCGTTGG
CAGCTTAATC AAGAAGACAA TTGTACAAAC ATCGATTTAA CCGAAAGTTC AGGGCAGATC
GTACTAAGTG CCCAAGGTAG CAACGATATC ACCGGGCAGA TTGATTCTGT GACGAGTGCT
GGAACGCTAA TCGGTGGTGA ACTCTTAGGT AACAGCAACT TTGCCTTAAC GGGCAGTGGT
GCAGGCAATG GTCCGGGGGT GGCTGGTGTG GTTGAAGTGT CTTTAGATCC CAGCGTGGGT
AATCCATCTT GGGCGCAATA CATGAACTTT GATTGGAGCG GTGACGGTTT TATCTGCCCA
GACTTAGCAT TGTGCTCAGG CGCGACCGCT GTCGATGGGC CCGCTTCCAT AATAACTTTT
GGTCTTTACC GCGGAAATGA CCGGATCATT CATTGGCGGG AAGTGTTCCA TTAA
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| Protein sequence | MKGIRAIHKR IGRFNSLILL LMLNMLSCSQ VLADTLCSDT ETSRARGALF DSGGASGNYA
NNEDCEFTIR APQGGAITLS FSDFDYEENY DFFSVYDGEN VSAPLLGTFS GSNLPSVLVA
TSGTMFIEHS TDGSAVRQGL AATWSISSNS CSTETFNMAD HFPSASYSAS SGSAPWSSDW
LEAGESDGPA RGYLRVNNSL CSSGNCLRLG VVASENPRSY SARFVYRRLN LSDAVTAQLN
FNYRVGHNAG ESLIRLGIST NGGSTWTNLK DYTITASNFS STAQSFDISA FIGSNVAIGF
QVSGTNSESG FYVDDINVSA AKAEVCDGPA IAFYQFEQEE WATTNSVIDS SASGYDASPL
GDAFPTFPSI QTSCQVMSVP KNSDANISAG IDTELRVDTD IGDKGTISFW YRSALAWSNG
RGRQLFDAST WIGNANSKYF NLSLRNGTLR FGLEDTTDND AAASVSGLTF APYEWVHIAV
TYDYSKDSAV IFINGRQASQ TSDLGLNGDM PVLDTLYIGD NRSLYNFADS PANSADGEFD
DVRIYDYAQS QSQVNTDLDN VSPCAVAPVA IYEFEQVEFN GSQSILDSTS NQRHASPLGE
VVSVLSTAQV SCRFADVPMN TDATVIDTID SGFSPNDIGQ AGTISFWYRS NEDWSSNNAR
QLFDASTDAG NSNSTAKYFY LSLRASTLYF GLEDIDDRDA EAIVSGLNFS AGEWVHVAVG
YDYAAKTAVI HINGAEAGRS NSLNLNNNIA QFNTLYFGDN RSDYIVTNMT ANSANGQFDN
IRVNAYVQNS TEITQDMNAI ATCQSIHHYQ LEHDGQGLTC ETENISIKAC ADENCTQLYT
ETSSVELAPD GWRAGNPLVF TGEIINTPLA VLEPELATLD IVRANPSAPL RCLNTGSGIE
SCDINFVDAG FEFIGEQVTD KFLPDQLSQA NFVGANLRAV QNDNGVCKAL LQGQQDVTFG
VNCVSPNRCL TDFSGIDVSA SPDGESTGIV SLTFDADGVA SLGAFNYADA GRVALRAAAE
INGVSITSGD ASVDIAPTKL TLAVAPPALI YTDTDFSVYP SSADTDVYPA GEEFTFNITA
YGVLGDIALP NYQPSTLQIA VERILPFESS AAEGTLVFGD GASVLGNVNK QFADTPELTF
VEGQYNYQAT FSEVGVIRLD IRDIDYLSDN NNPTSVINSQ DPITLGEFTP AYFDVQVSTA
PELVNQCGNF TYMGQPISFS PTTQVELIAM NALGEATKNF INGYWRYNPD TAAAVVIDDA
SVHAGASPAV TRITGAASAT ITAPSAFTGI TLIDVPDGTF TYEKVATDFA AYPLIEPFVA
AVDMTFLATF LSGDNNVCYQ SDYPVSGCEG FRISDATGSN ITGVDVNVRH GRLALGPNFG
PEPDFLVTPV SAEHYLNGRW QLNQEDNCTN IDLTESSGQI VLSAQGSNDI TGQIDSVTSA
GTLIGGELLG NSNFALTGSG AGNGPGVAGV VEVSLDPSVG NPSWAQYMNF DWSGDGFICP
DLALCSGATA VDGPASIITF GLYRGNDRII HWREVFH
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