| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0178 |
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| Symbol | |
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| ID | 4174042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 208803 |
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| End bp | 209369 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053177 |
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| Product | prepilin-type cleavage/methylation |
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| Protein accession | YP_659764 |
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| Protein GI | 109896509 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAACG TGCGTAGCAA AAACACATTA CCTGTTATTG CTGCGCATCG TGGTTTTACA
CTGGTTGAAC TTGTCGTCGT GATCCTGATT ATTGGTGTAC TTGCAGTATC TGCTGCAAGT
CGGTTTGATA GCACCGGATA CGCCGAATAC AGTTACCAGT CTCGTTTACT ATCCGCGCTG
CGAGCCATGC AGCAACGCGC CATGCAAGAT ACCCGTGCAG ATTATTGCTT CCAAATAAAC
TTCAATATTT CCAATCCTGG CTTTGGCCCG CCTACGCTTA GTTATCGTAA CAACACCCCT
GCTGAGCATA CCGCGACTTG CGCTACTGCG ATTAATTACA CCACACCTGA ATTCTTACGC
ACCAGTAATG GTGAAATCGC TGCTGACGGT ATTGGCCTGA GCACGTTAGA CACAGGAAAT
GGTGCATTTA ATTGGATACG ATTTGATAGC CTAGGTCGCC CATTGACAAG TGCTGGCAGT
TGCCAAGCCA CTTGCCGCAT AACCTTTCAG GGAACGCAAT CCCCGGCCAT TTGCGTAGAA
AGCGAAGGAT ATATTCGTGA GTGTTAA
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| Protein sequence | MRNVRSKNTL PVIAAHRGFT LVELVVVILI IGVLAVSAAS RFDSTGYAEY SYQSRLLSAL
RAMQQRAMQD TRADYCFQIN FNISNPGFGP PTLSYRNNTP AEHTATCATA INYTTPEFLR
TSNGEIAADG IGLSTLDTGN GAFNWIRFDS LGRPLTSAGS CQATCRITFQ GTQSPAICVE
SEGYIREC
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