| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0163 |
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| Symbol | argD |
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| ID | 4172650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 194129 |
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| End bp | 195334 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053162 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_659749 |
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| Protein GI | 109896494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTAA CCAGAGAATT ATTCGATGAC GTCATGGTGC CCAACTATGC GCCCTCCGCG
ATTATTCCAG TGCGCGGTAA AGGCTCTCGC GTGTGGGACC AAAATGACAA AGAGTTTATC
GACTTTGCTG GTGGCATTGC GGTGAATTGT TTGGGTCATT GTCACCCTGC TTTAGTGCAA
GCTTTAACAG AGCAAGGGCA AAAATTGTGG CATCTTTCTA ACGTGATGAC TAACGAGCCG
GCGCTGCGCC TAGCCCAAAG ACTCACGCAA TTAACATTCG CTGAAAAAGT GTATTTCGCC
AATTCAGGTG CAGAAGCCAA CGAAGCTGCA CTAAAGCTTG CTCGGCGTTG GGCGTTGGAT
GTGTATGGGG CTCAAAAATC ACAAATTATC TCGTTCAACA AGAGCTTTCA CGGGCGTACG
TTTTTCACTG TAACGGTGGG CGGCCAAACC GCCTATAGTG ATGGTTTTGG CCCTAAGCCA
GGCGATATTG CACATGCAGA TTACAACGAT TTAGCCGGCT TAGAAGCGCT CATTTCTGAT
AAAACTTGCG CTGTAATGCT AGAGCCGCTG CAAGGTGAAG GGGGTATCAT TTCACCTGAC
GCTGATTTTA TAAAAGGCGT TAGGGCGCTA TGCGATAAGC ACAATGCGCT GATGATTTTT
GACGAGGTGC AAACGGGGGT TGGTCGTACG GGGGCTATGT ACGCTTATCA AAACTTAGGG
GTAACACCAG ACATTTTAAC CACGGCGAAA GCCCTTGGTG GCGGATTCCC TATTGGGGCC
ATGCTAACCA CGACTGAGAT TGCCAAGCAT TTGAAAATCG GTACGCACGG CTCAACTTAT
GGTGGTAACC CACTGGCATG CGCTGTCGCA GAAGCAGTAT TAGACGTGGT TAGTCACGAC
GACGTTTTGC AGGGGGTGGC GAAGCGTGAA ACCTTGTTTC GTGAAGGCTT AGAGCGTATC
AACGACAAAT ATCACGTATT CGCTGAAATT CGTGGCAAAG GGTTGTTACT CGGCGCCGCA
TTAAATGAAA AATATAAAGG CCGAGCAAAA GCATTTTTAG TCGCAGCAGC AGAGCATGGC
TTGATGTGCC TAATTGCAGG GGCTGATGTG GTGCGCTTCA CTCCGTCTTT GGTGATCCCA
GAGCAAGACA TTGAATTAGG CTTACAGCGC TTTGAGTTGG CCGTTGCGCA AGTGGTTAAA
GGCTAA
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| Protein sequence | MQVTRELFDD VMVPNYAPSA IIPVRGKGSR VWDQNDKEFI DFAGGIAVNC LGHCHPALVQ
ALTEQGQKLW HLSNVMTNEP ALRLAQRLTQ LTFAEKVYFA NSGAEANEAA LKLARRWALD
VYGAQKSQII SFNKSFHGRT FFTVTVGGQT AYSDGFGPKP GDIAHADYND LAGLEALISD
KTCAVMLEPL QGEGGIISPD ADFIKGVRAL CDKHNALMIF DEVQTGVGRT GAMYAYQNLG
VTPDILTTAK ALGGGFPIGA MLTTTEIAKH LKIGTHGSTY GGNPLACAVA EAVLDVVSHD
DVLQGVAKRE TLFREGLERI NDKYHVFAEI RGKGLLLGAA LNEKYKGRAK AFLVAAAEHG
LMCLIAGADV VRFTPSLVIP EQDIELGLQR FELAVAQVVK G
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