Gene Patl_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0160 
Symbol 
ID4172647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp191371 
End bp192522 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content49% 
IMG OID638053159 
Productamine dehydrogenase 
Protein accessionYP_659746 
Protein GI109896491 
COG category 
COG ID 
TIGRFAM ID[TIGR02658] methylamine dehydrogenase heavy chain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGCA AAAAAATACT ACTTCTCTCA TCACTGCTGT TTTGTTCGGT GAGCCATGCC 
GAATTACCTA ATGACACCGT GCCCAAAGTA CTCACGCTTC CCCAGACGCA CGGCGAATCG
TGGTTGTATG TGCAAGACAT GAATTTCTGG GGAATGACCG AGGGCAAGGT GATCATTCTG
GACATCGCCA GCAGCACACG TAACTATAAA GGCCAAGTGA GCACAGGGTT TTTCGGCTCG
TTTATTCCTT CCACTGAACG CAACGAAATG TACAGCGCCG AAACCTATTA CTCACGTGGC
ACTCGCGGAG TGCGCACAGA TGTTTTGTCC GTTTGGGATA ACGCCACTCT TACCGTGAAG
AATGAAATTG AATTGCCTCA CAAGAAGCGC GCTCAAACGG TTTCAGAGAA AAATGCCACT
CAGCTAATCG ATGAAGACAA GTACATGCTT GTTTTCAACT TTACCCCTGC CACCTCAGTG
TCCGTCATCG ATATGCTCGA GCACAAAGTC CTCAACGACG TGGACATTCC AGGTTGCAGC
TTAATTTATC CCTCTGGTGA ACGCGGCTTT AGTACCTTGT GCGCCGATGG ATCCATGCTA
AGCATTCAGC TAGATGAACA AGGCGAAGTC GCCAGCGAGA CCCGCGTTCC GTCGTTTTTC
AATGTGGATG AAGACCCGCT TTTCGAAAAA TACGCCCGTA TCAACAATAT CGGTTATTTC
CCAACGTTCC ATGGCTATAT GCAACCCGTG GACCTAAGTG GCGATGTGGC GAAGCCGCAA
CAGAAGTGGG ATCTGCTAAG CGCCAGCGAG CGTGAGCAAA ACTGGCGACC TGGTGGGTGG
CAAATTATAT CAGGACACCC TGATGGACGC GTTTTTGTCT TGATGCACAA AGATGGCGTA
AACGGCAGCC ATAAAGACGG CGGCACAGAA GTATGGGTGT ATGACACCCA GCAACACAAA
AAAGTGAAAA CCATCCCTCT TGAAACCCAT GGCATTTCCC TTGAAATCAC CAAAGGTGAC
AACCCACTTT TAGCTGTCAC CAATGCAAAC ATGATGATCG ACGTGTACGA CGCAAAAAGT
GCAGAGCTAC AGCGTACCCT CTCCATTGGT GGTGATAACG CTAACCCCTT CACACTCACG
GCTGTGGAGT AA
 
Protein sequence
MVSKKILLLS SLLFCSVSHA ELPNDTVPKV LTLPQTHGES WLYVQDMNFW GMTEGKVIIL 
DIASSTRNYK GQVSTGFFGS FIPSTERNEM YSAETYYSRG TRGVRTDVLS VWDNATLTVK
NEIELPHKKR AQTVSEKNAT QLIDEDKYML VFNFTPATSV SVIDMLEHKV LNDVDIPGCS
LIYPSGERGF STLCADGSML SIQLDEQGEV ASETRVPSFF NVDEDPLFEK YARINNIGYF
PTFHGYMQPV DLSGDVAKPQ QKWDLLSASE REQNWRPGGW QIISGHPDGR VFVLMHKDGV
NGSHKDGGTE VWVYDTQQHK KVKTIPLETH GISLEITKGD NPLLAVTNAN MMIDVYDAKS
AELQRTLSIG GDNANPFTLT AVE