Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0160 |
Symbol | |
ID | 4172647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 191371 |
End bp | 192522 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053159 |
Product | amine dehydrogenase |
Protein accession | YP_659746 |
Protein GI | 109896491 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02658] methylamine dehydrogenase heavy chain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAGCA AAAAAATACT ACTTCTCTCA TCACTGCTGT TTTGTTCGGT GAGCCATGCC GAATTACCTA ATGACACCGT GCCCAAAGTA CTCACGCTTC CCCAGACGCA CGGCGAATCG TGGTTGTATG TGCAAGACAT GAATTTCTGG GGAATGACCG AGGGCAAGGT GATCATTCTG GACATCGCCA GCAGCACACG TAACTATAAA GGCCAAGTGA GCACAGGGTT TTTCGGCTCG TTTATTCCTT CCACTGAACG CAACGAAATG TACAGCGCCG AAACCTATTA CTCACGTGGC ACTCGCGGAG TGCGCACAGA TGTTTTGTCC GTTTGGGATA ACGCCACTCT TACCGTGAAG AATGAAATTG AATTGCCTCA CAAGAAGCGC GCTCAAACGG TTTCAGAGAA AAATGCCACT CAGCTAATCG ATGAAGACAA GTACATGCTT GTTTTCAACT TTACCCCTGC CACCTCAGTG TCCGTCATCG ATATGCTCGA GCACAAAGTC CTCAACGACG TGGACATTCC AGGTTGCAGC TTAATTTATC CCTCTGGTGA ACGCGGCTTT AGTACCTTGT GCGCCGATGG ATCCATGCTA AGCATTCAGC TAGATGAACA AGGCGAAGTC GCCAGCGAGA CCCGCGTTCC GTCGTTTTTC AATGTGGATG AAGACCCGCT TTTCGAAAAA TACGCCCGTA TCAACAATAT CGGTTATTTC CCAACGTTCC ATGGCTATAT GCAACCCGTG GACCTAAGTG GCGATGTGGC GAAGCCGCAA CAGAAGTGGG ATCTGCTAAG CGCCAGCGAG CGTGAGCAAA ACTGGCGACC TGGTGGGTGG CAAATTATAT CAGGACACCC TGATGGACGC GTTTTTGTCT TGATGCACAA AGATGGCGTA AACGGCAGCC ATAAAGACGG CGGCACAGAA GTATGGGTGT ATGACACCCA GCAACACAAA AAAGTGAAAA CCATCCCTCT TGAAACCCAT GGCATTTCCC TTGAAATCAC CAAAGGTGAC AACCCACTTT TAGCTGTCAC CAATGCAAAC ATGATGATCG ACGTGTACGA CGCAAAAAGT GCAGAGCTAC AGCGTACCCT CTCCATTGGT GGTGATAACG CTAACCCCTT CACACTCACG GCTGTGGAGT AA
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Protein sequence | MVSKKILLLS SLLFCSVSHA ELPNDTVPKV LTLPQTHGES WLYVQDMNFW GMTEGKVIIL DIASSTRNYK GQVSTGFFGS FIPSTERNEM YSAETYYSRG TRGVRTDVLS VWDNATLTVK NEIELPHKKR AQTVSEKNAT QLIDEDKYML VFNFTPATSV SVIDMLEHKV LNDVDIPGCS LIYPSGERGF STLCADGSML SIQLDEQGEV ASETRVPSFF NVDEDPLFEK YARINNIGYF PTFHGYMQPV DLSGDVAKPQ QKWDLLSASE REQNWRPGGW QIISGHPDGR VFVLMHKDGV NGSHKDGGTE VWVYDTQQHK KVKTIPLETH GISLEITKGD NPLLAVTNAN MMIDVYDAKS AELQRTLSIG GDNANPFTLT AVE
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