Gene Patl_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0157 
Symbol 
ID4172644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp189646 
End bp190203 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID638053156 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_659743 
Protein GI109896488 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02659] methylamine dehydrogenase light chain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.436355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGT TTGATAAATT CTTTGAAAAT AAAACCCGCA ATATCGCCCG CACTAGTTCA 
AGACGAAGTT TTTTATCCAA TGTGGGGAAA GCCGTGGTAG GCGTATCAGT TATTCCAGCC 
TTACCCGTTG CCAAAGCTGC CGGTGGCGGC GCTTCTGCGG GAGCCCATTA CCCTGGCGTA 
GCGGCGCAAC CTAGCACAAA TGAAGGTGAT CCTGGCGACC CAACCACCTG CGAATACTGG 
CGTTACTGCG GTATCGACGG CTTTTTATGT TCTTGCTGTG GCGGCTCTCA ATCAGCCTGT 
CCGCCGGGCA CTGAAATGTC ACCCATCACC TGGATAGGCA CCTGCCTTAA TCCTGCGGAC 
AACAAGCACT ACATCATTTC TTATAACGAT TGCTGTGGTA AGGCCGCATG TGGACGTTGC 
TTCTGTAACC GCAATGAGGA TGACACCCCT ATGTATCGCG CGTTTTCAAA CAACGATACT 
AACTGGTGTG TGGGCGCATC GAGCGAAACC TATGTTTGCT CAACGGCAAT AATCCTCGGC 
ACATCGATTG AGTCATAG
 
Protein sequence
MKWFDKFFEN KTRNIARTSS RRSFLSNVGK AVVGVSVIPA LPVAKAAGGG ASAGAHYPGV 
AAQPSTNEGD PGDPTTCEYW RYCGIDGFLC SCCGGSQSAC PPGTEMSPIT WIGTCLNPAD 
NKHYIISYND CCGKAACGRC FCNRNEDDTP MYRAFSNNDT NWCVGASSET YVCSTAIILG 
TSIES