| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0152 |
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| Symbol | |
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| ID | 4172639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 182192 |
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| End bp | 183529 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053151 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_659738 |
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| Protein GI | 109896483 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR02765] cryptochrome, DASH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGC TATCTTCAGC CCTCCCAAAA CGAGGCATTT TTTGGTTTCG TCATGATCTG
CGTTTACATG ATAACCCTGC GCTTGTTGCG CTTAGTGAAC AAGTCGATGA GCTATTATGT
GTATTTATAA TCGACCCACG ATGGTTCAAG AGTAGCCATT TTCAGTCGGC GCATATGGGC
GATAAACGTT GGGCGTTCCT GCAACAGAGT CTGTCTGAAT TACAGCGTCA TTTGCAGGAG
CAAGGCCAAC AGCTGTTCGT ACTTGAGGGA GAAACCTTAG AGGTACTTGA CGCCCTTATT
GGTAGTTATA CTCCAGATAT AGTCGCCTCA GGTATGCACC CTGGTGTGTA TGAGCGCCAG
CAGTGGCAAA GAGTAAAACA AGGTAACCCT AATACACTCT TTATTCAGGA AAACGGTCAC
AGCTTATTTC AACCTGCTAC GCTACCGTTT GAAATAGAAT ACTTGCCCGC AAGCTTCACT
CCCTTTAGGA AACGCGTCGA GGATCTGCAA GTAGCAGTTG CTTTGCCAGC CCCGACAGCT
CTGCCACCCG CTCCCGATTT AGCTTGGTTA TCATCTAAGA ACGTAAACCC ACCGAAAAAA
GCAATTGGGC TTGCCTTCAC AGGAGGTGAG GACGCTGCTT TAGCGCAACT TGAGTACACT
CTTTTTACCA GCCACAACAT TAAAAATTAT AAACAAACAC GTAACGGTTT GGATGGGTGG
GACTATTCCA GCAAGCTATC CCCTTGGCTC GCCAATGGGT GCCTTTCTGT TAGGCAAGTA
TTCACTGAGC TGAGGCGCTA CGAATCAGAA TATGAAAAAA ATGACTCAAC CTATTGGCTT
TACTTTGAGC TGCTATGGCG AGAGTACTTT CAATGGCACC TGTTTAAATA CCAATCAAAA
CTATTTCAGT TTTCTGGGAC GCAAGACACT CGTCCTTTAA CCACCTTCGT CGCTTTACGG
TTCGCAATGT GGTGCCAAGG TGAAACGCCT TATCCCATCG TGAATGCCTG TATGAAGCAA
TTAAATCATA CTGGCTACAT GTCAAATCGA GGACGCCAGT TAGTCGCTAG TTGCTTGGTA
AATGAGCTCG GTGTTGATTG GCGCTTCGGG GCAGCTTACT TTGAACAACA ACTTGTCGAC
TTTGATGTGG CATCAAACTG GGGGAACTGG CAGTACCTTT CAGGTGTAGG CGTAGACCCT
AGAGGACATA GACGATTCGA TTTAGCCAAG CAGGCGCAAC AATATGATCC GAACGGGGAA
TTTGTGCGCC AATGGGCTGG GGATACATAC GTTAGCGGTA TAGACCAAAC AGACGCGGCA
GACTGGCCTC TTGGATAA
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| Protein sequence | MKKLSSALPK RGIFWFRHDL RLHDNPALVA LSEQVDELLC VFIIDPRWFK SSHFQSAHMG
DKRWAFLQQS LSELQRHLQE QGQQLFVLEG ETLEVLDALI GSYTPDIVAS GMHPGVYERQ
QWQRVKQGNP NTLFIQENGH SLFQPATLPF EIEYLPASFT PFRKRVEDLQ VAVALPAPTA
LPPAPDLAWL SSKNVNPPKK AIGLAFTGGE DAALAQLEYT LFTSHNIKNY KQTRNGLDGW
DYSSKLSPWL ANGCLSVRQV FTELRRYESE YEKNDSTYWL YFELLWREYF QWHLFKYQSK
LFQFSGTQDT RPLTTFVALR FAMWCQGETP YPIVNACMKQ LNHTGYMSNR GRQLVASCLV
NELGVDWRFG AAYFEQQLVD FDVASNWGNW QYLSGVGVDP RGHRRFDLAK QAQQYDPNGE
FVRQWAGDTY VSGIDQTDAA DWPLG
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