| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0151 |
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| Symbol | |
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| ID | 4172638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 180712 |
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| End bp | 182199 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053150 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_659737 |
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| Protein GI | 109896482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.617218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAG AGCATATCAA TGTGGTGTGG TTGAAGCGAG ACTTGCGTTT GAGAGATCAT
CAAGCCTTAT TCGCTGCCGC CCAGCAACCG CTGCCGGTGG TCATGATGTA CTTATTTGAG
CCCTCAGTTA TAGCAGATCC GCATTACGAT GTACGTCATT GGCGGTTTGT GTGGCAATCC
ATAGTCGACC TAAACAGCCA ACTCGCCGAT TACAATGCTC GCATCATTGT ATTGTTCGAA
GAAGCCCACA GCGTGTTTGC TCAACTTATG CAACGTTTTC ATATTGCTGG CGTGTACAGC
CATCAAGAAA TCGGTCTTGC CTGCACTTAC AAACGGGATA AAGCTATCGC GCGCATGTTA
GATGCTGAAG GCATAAGCTG GCACGAATAC AATCATGGCG GCGTTATCCG TGGTGCTACT
CACCGACGTG ACTGGGAGCA AAATTGGGAT AAGCATATGA ATGCACAATG TGCAGATACG
CCTCTACATG AAGTCAATTG GCTAACCTTT GCCACCTTGA TGACGCTAGA TGAAAGCGAA
GCATTGCCAC AAGAGTACAA AACTCAACGT CCTGCGTTTC AGCTTGGGGG TGAAAAACGC
GCTTGGTACA CCTTGCATCA TTTTCTAAAA GAGCGCGGAA AGGCGTACGC CTATTCAGTT
TCTAGCCCGA TAAAAAGTAG AACAGCCTGC TCTAGGCTTT CTCCCTATTT GGCTTGGGGA
AACATAAGTA CTCGCCAAGT TTATCAATCA ACTGCATCTA AAAAGCACAA AGATGGGTGG
CAAAGGGCTA TCAACGCCTT TCGGTCTCGC CTGCACTGGC ATTGCCATTT TATTCAGAAA
TTTGAAAGTG AATCAGACAT GGAGTTTCGC CCTGTCAACA AAGCCTACCT TGCTTACGAA
TATGAGCAAG GTGAACAAAA AGACGCTAAC TTACAGGCAT GGAAAACAGG TCAAACGGGC
ATCCCCATCG TGGACGCTTC GATACGCTGT CTGCATCAAA CGGGTTACCT TAATTTCCGC
ATGCGAGCCA TGTTAGTGAG CTTTTTGTGT CACCACTTAA ATATTGATTG GCGAGAAGGA
GCCATTCATT TAGCTCAGCT CTTTTTAGAC TTTGAACCAG GGATACATTA TCCGCAATTT
CAAATGCAAG CGTCAGTAAC GGGGACCAAC CTTATCCGCT TGTACAACCC GGTCAAACAA
TCACAAGACA AGGATCCTCA AGGGCAGTTC ATCCGCCGCT TTATACCTGA AATTTCTGAC
CTGCCGGATG CTCTCATTCA CACGCCATGG CTACTTACCC CCATGGAATG TCAAATATAT
GAAGTGGAAT TAGGACGAAC ATACCCGCAC CCAATGATTG ATCTTGAACA AACCGGTAAG
CGAGCAAGGG ATACTTTGTG GACGTTTCAA AAACGCGATG ACGTTCAACA AGAAACTAAG
CGCATTCTCA AGCAACACAC CCTGGTAAAT CGTCCTAGAA GAATCTGA
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| Protein sequence | MDKEHINVVW LKRDLRLRDH QALFAAAQQP LPVVMMYLFE PSVIADPHYD VRHWRFVWQS
IVDLNSQLAD YNARIIVLFE EAHSVFAQLM QRFHIAGVYS HQEIGLACTY KRDKAIARML
DAEGISWHEY NHGGVIRGAT HRRDWEQNWD KHMNAQCADT PLHEVNWLTF ATLMTLDESE
ALPQEYKTQR PAFQLGGEKR AWYTLHHFLK ERGKAYAYSV SSPIKSRTAC SRLSPYLAWG
NISTRQVYQS TASKKHKDGW QRAINAFRSR LHWHCHFIQK FESESDMEFR PVNKAYLAYE
YEQGEQKDAN LQAWKTGQTG IPIVDASIRC LHQTGYLNFR MRAMLVSFLC HHLNIDWREG
AIHLAQLFLD FEPGIHYPQF QMQASVTGTN LIRLYNPVKQ SQDKDPQGQF IRRFIPEISD
LPDALIHTPW LLTPMECQIY EVELGRTYPH PMIDLEQTGK RARDTLWTFQ KRDDVQQETK
RILKQHTLVN RPRRI
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