Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0145 |
Symbol | |
ID | 4172632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 171502 |
End bp | 171909 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638053144 |
Product | thioesterase superfamily protein |
Protein accession | YP_659731 |
Protein GI | 109896476 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTATTG AAGATTTTAA TGTGCGTTTT TGTGAAACGG ATGCCCTAGC ACATGTAAGT AATACTGTGT TGGTGGACTG GTTTGAAATG GCTCGTGAGC CTATTTTTAA GATATTTAGC CCTGAATTAG ATTTAAAAAA TTGGCCGCTT ATTTTAGCCA GCTACAAAGT CGATTTTCTG GACCAAATGC ACTATGGCCA TCCTGTTCAA GTACGCACTT ACATCAGTCG TATTGGTGGC AGCTCGTTTG ACGCCTACCA AGAGCTTTGG CAAAACGGCA CTAAACGCGC CACAGGCACA ACCACTATGG TGCAGTACGA CTACGCTGAG AAAAAATCTG TGGTTATTAA TGAAGAAATC CGTGCACAGC TGACCGAGCA TGCCATACCT CGGGGCGTGA ATGCCTAA
|
Protein sequence | MFIEDFNVRF CETDALAHVS NTVLVDWFEM AREPIFKIFS PELDLKNWPL ILASYKVDFL DQMHYGHPVQ VRTYISRIGG SSFDAYQELW QNGTKRATGT TTMVQYDYAE KKSVVINEEI RAQLTEHAIP RGVNA
|
| |