Gene Patl_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0144 
Symbol 
ID4172631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp170802 
End bp171509 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID638053143 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_659730 
Protein GI109896475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAGT CAGAAACTTT CATTAAGGTT ATTGAGCATG CAATCAGTGA CGAACTGTGT 
GATCAGTTCG TTACTCAATT TGATTCCAGT AAAAATATCC TACCTGGGCG CACAGGTGGC 
GGTATAGATA CAGACAAAAA ACGCAGTAGT GATGTATCCA TTATCACCCA TCCTGAATTT 
AACGTCCCCT ATCAAGCACT ATTGCCTATT CTTGGGCAAC ACATTTTACG CTATTTCGAA 
GAGTACTTTT TCGCCTTAAT TGGCCCTATC GGCCTCACGG TGAAACACCC AAAGACAGGG 
CAGCCCGTTA AACTAACCCA TGACAATTTT GCAGAAGTAG GTTTGCCAAA TTTGTCTAAT 
TTGATGACGT ACCTTTTTAG GTTAGGCAAC ATCAACGCGC AAAAGTACGA AAAACAACAA 
GGTGGCTACC CTTATTGGCA TTCAGAGGTG TATCCACAGT CGAAGAGTAC CGACGCGCTG 
CACCGGATAT TGCTGTTTAT GTTTTACTTA AATGATGTGG ATGAAGGCGG GGAAACCGAG 
TTTTACTACC AAGATGTAAG TATTAAACCC CGCAAAGGCA CTATGGTGAT TGCACCAGCT 
TACTTTACCC ATACCCACCG AGGTAATGTA CCCATCTCAA ACGACAAGTA CATTCTCACC 
TCATGGGTGC AATTTAATCA AGGTAACGCG ATTTTCGCTC AACGCTAA
 
Protein sequence
MPKSETFIKV IEHAISDELC DQFVTQFDSS KNILPGRTGG GIDTDKKRSS DVSIITHPEF 
NVPYQALLPI LGQHILRYFE EYFFALIGPI GLTVKHPKTG QPVKLTHDNF AEVGLPNLSN 
LMTYLFRLGN INAQKYEKQQ GGYPYWHSEV YPQSKSTDAL HRILLFMFYL NDVDEGGETE 
FYYQDVSIKP RKGTMVIAPA YFTHTHRGNV PISNDKYILT SWVQFNQGNA IFAQR