| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0138 |
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| Symbol | nudE |
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| ID | 4172165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 165229 |
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| End bp | 165792 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053137 |
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| Product | ADP-ribose diphosphatase NudE |
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| Protein accession | YP_659724 |
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| Protein GI | 109896469 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA TAGACCCCAA CAAAACACTT CCACAAATTC ACCAGCGACG CACCGTAGCC
AAAAGTGGTT TATTCACCGT TGAGCAAATT GATCTAGAAT TTTCTAATGG CGAATTACGC
ACATTCGAAC GCATGGCGGG CGGTGGACGC GGTGCCGTAA TGATAGTGCC TTTTATTAAT
GAGCATGAGT TTCTATTGGT TCGCGAATAT GCTGCGGGTA CGCACTCTTA TCAGTTGGGT
TTCCCCAAAG GTTTAATTGA CCCTGGTGAA GAATCCCACG AAGCAGCCAA TCGCGAATTA
AAAGAGGAAG TCGGTTTCGG CGCACATACG CTACATTACT TACAAAACGT TAGCATGGCC
CCCGCATTTT TTAACGCACG CATGGATATT TTCGTTGCCC AAGATTTGTA TGAAAAGACG
TTACCCGGCG ATGAACCAGA GCCTTTAGAC GTCATTACGT GGTCTATTAA CGACCTCGAT
GGCCTATTAG CCCGTGAAGA TTTCGTTGAA GCCCGCTGTA TTACAGCTCT TTTTCTGGCC
CAAAAGTGGT TAAAGGAACA ATAA
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| Protein sequence | MSKIDPNKTL PQIHQRRTVA KSGLFTVEQI DLEFSNGELR TFERMAGGGR GAVMIVPFIN
EHEFLLVREY AAGTHSYQLG FPKGLIDPGE ESHEAANREL KEEVGFGAHT LHYLQNVSMA
PAFFNARMDI FVAQDLYEKT LPGDEPEPLD VITWSINDLD GLLAREDFVE ARCITALFLA
QKWLKEQ
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