| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0130 |
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| Symbol | |
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| ID | 4172157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 157009 |
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| End bp | 159252 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053129 |
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| Product | putative alpha-1,2-mannosidase |
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| Protein accession | YP_659716 |
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| Protein GI | 109896461 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AATTTTTAGC GGGCGCATTC TCGCTATGTG CTGTGGGCAG CCTTGCTGGT
TGTGCCACAA GCTCAGTTTC TAGCATGCAA CAAGCTTCAG TGCCACAGGC CACAATCGTC
CAGGTCGCTG ACGAGCAGTT ATTACAATAC GCAGACCCAT TTATTGGCAC AGGCGGCCAC
GGCCACACGT TTCCCGGTGC AGTGGTACCT TTTGGTATGG TGCAATTAAG CCCTGACAAT
CCTTCTAAAG GCTGGGATTG GACTTCCGGT TATAACTACA GTGACAACCA GTTGCTTGGT
TTTAGCCATA CGCATTTATC TGGCACTGGT GTTGGTGACT TGCTTGATGT GCTTGTGATG
CCGTTTCGTG GTGATTACAA AACCCGACGT GATAATGAAC TAAAGCACGT AGTGAGTGAG
TATTCACATT CTGATGAAAG TGCCTCACCC GGATACTACC AAGTGGGGTT GCCTGAAGAG
CAGGTTAACG CCGAGCTAAC GGCAACCGAG CGCACTGGTG TTCATCGTTA TACCTTTTCA
GGCCAAGAAG ACGCTAAAGT ATTAATCGAT TTAGGCTATG CCCAGAACTA CGATAAATCT
GTGGCCACCT TTATGCGTGT GATAGACGAT AGCACCTTAG TGGGCTATCG CATTTCAACC
GGCTGGAGTG ACTACCAGCC TGTGTATTTT GTTGCCAAGT TTAACCAACC CTTTGCACAT
CAGTTTTACA AAGAAGGCGA AGCGCTAGCC GGCCCGTTCA TCAATGCGGA AAAAAGCGAA
GTGGTGCTTA ACTTTGGTGA CATTGCTGAT AAGGCTTTGG TGGCAAAAGT AGGTATTTCT
TACGTGAGTA TTGCTGGAGC GAAGCAAAAC TTAGCAGCAG AAGTCGCTGA TTTTGATTTC
GATAATACTA AGCGGCAAGC ACAAGCACTG TGGGCAGCTC AATTAGGCAA GTTTAACGTC
ACTGATGATA ACGAGCAGGC GAAACGTAAG TTCTACACCG CGTTGTATCA TTCGTTTTTA
GCCCCCCAGA CATTTAATGA CGTTAATGGC AGCTATTTCG GTGCAGATGG CAGCGCCCAC
AATAGTCAGC AATTCAAGCG TTACTCCTTG TTCTCGCTAT GGGATACGTT TCGCGCATTA
CATCCTTTAT TGACCATTTC TAACGGTGAG CGGGTCAATG ACATGGTCAG CTCGATGATG
GCCTTTTATG ACGAAACCGG CTTATTGCCT TCGTGGGATT TAATGGCCAA TGAAACCGAT
GTGATGATCG GGTATCACGC AGTGCCAGTG ATAGTGGATG CGTACTTTAA AGGGTTGACT
GATGTAGACC CTGAATTGTT ATTTCAGGCG TTGAAAGCCT CTGCAATGCA AACGCGTTTT
GGTATCGATC TGTTTGCTGA GTATGGTTAT GTGCCCTCTG ACTTAGAAGT AGAAGCCGTA
TCGAAAACCC TAGAATATGC TTTTGATGAC TGGGCAATTG CACGCATGGC TAAAGCGCTT
AATAAAAACG CTGACTATGC CTATTTCACG CAACGAGCTG AGTCTTATAA AACCTTGTTC
GATAAACAAA CCGGCTTTAT GCGTGGTAAA ACCCAACAGG GTGAATGGGT GAAAAACTTC
AGCCCAACCC ATGTAGACCA CCGCACGACG GATTACACCG AGGCGAATGC GTGGCAGTAC
ACTTGGTTTG TGCCCCACGA TGTTGATGGC TTGATGGCAT TATTCGGCGG TGAAGCGCCA
TTTCTAAATA AATTAGATAC CTTATTTAGT ACTGATTCCT TTATGGAAGG AGATGTATCA
CCGGATATTT CTGGCTTGAT TGGGCAGTAT GCCCACGGTA ATGAGCCTGT ACATCATGTG
CCTTACATGT ATTCCCTGAC GTCGCAAAAA TGGAAAGGCG AACAGCGCAT AAAAGAGATC
CGCGAGACCA TGTATCGCGA TAACCCAGAT GGATTATCGG GTAATGACGA TGTGGGACAA
ATGTCTGCTT GGTATGTCTT TAGTGCTCTT GGGTTCTACC CACTAAACCC AGCCGATGGG
CAGTATGTAC TAGGCACCCC GCAGTTTGAT TCAGTGCAGA TCCAACTGCC AGACGATAAA
GTTTTCACTA TTAAGCGTGT GCAATCCGCT GAAGATACGG CTGGCTATGT AAAAGAAGCC
ACACTTAATG GTCAGCCTGT CAATATGAAC ACCATTAGTC ACAGTGAATT GATGCAGGGC
GGCGAGCTTA TTTTCACTTT TTGA
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| Protein sequence | MKKQFLAGAF SLCAVGSLAG CATSSVSSMQ QASVPQATIV QVADEQLLQY ADPFIGTGGH
GHTFPGAVVP FGMVQLSPDN PSKGWDWTSG YNYSDNQLLG FSHTHLSGTG VGDLLDVLVM
PFRGDYKTRR DNELKHVVSE YSHSDESASP GYYQVGLPEE QVNAELTATE RTGVHRYTFS
GQEDAKVLID LGYAQNYDKS VATFMRVIDD STLVGYRIST GWSDYQPVYF VAKFNQPFAH
QFYKEGEALA GPFINAEKSE VVLNFGDIAD KALVAKVGIS YVSIAGAKQN LAAEVADFDF
DNTKRQAQAL WAAQLGKFNV TDDNEQAKRK FYTALYHSFL APQTFNDVNG SYFGADGSAH
NSQQFKRYSL FSLWDTFRAL HPLLTISNGE RVNDMVSSMM AFYDETGLLP SWDLMANETD
VMIGYHAVPV IVDAYFKGLT DVDPELLFQA LKASAMQTRF GIDLFAEYGY VPSDLEVEAV
SKTLEYAFDD WAIARMAKAL NKNADYAYFT QRAESYKTLF DKQTGFMRGK TQQGEWVKNF
SPTHVDHRTT DYTEANAWQY TWFVPHDVDG LMALFGGEAP FLNKLDTLFS TDSFMEGDVS
PDISGLIGQY AHGNEPVHHV PYMYSLTSQK WKGEQRIKEI RETMYRDNPD GLSGNDDVGQ
MSAWYVFSAL GFYPLNPADG QYVLGTPQFD SVQIQLPDDK VFTIKRVQSA EDTAGYVKEA
TLNGQPVNMN TISHSELMQG GELIFTF
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