| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0127 |
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| Symbol | |
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| ID | 4172154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 151772 |
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| End bp | 152509 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638053126 |
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| Product | CutC |
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| Protein accession | YP_659713 |
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| Protein GI | 109896458 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3142] Uncharacterized protein involved in copper resistance |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.585644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGATA TCGAAATTTG CCTACCTTGT GATGACCTGG CGCATGTTGC CCAGCAAATT
CGTGCCGCAC ATAGAGGGAA AGCAGCGCGG GTAGAGCTTT GCAGCCATAT GGAACATCAG
GGACTCACGC CTAGTATGAA TGCCATGCAG CAAGCTAGGG CAGCGGCCCA AGGGGAGTTA
ATCTTGCTGG CAATGATCCG CCCTCGTGGT GGTGATTTTT GCTATGACGA GGGTGAAATA
CTGCAAATGC AGCATGACAT CGCTCTCGCT GCACAAGCTG GCATGCAAGG GGTGGTGCTC
GGCGCGCTCA CACCAGATAA CAAGCTGGAT CAGGGCGCGT TAACTCGACT AATTGCGGTG
GCTAATAACG CTAATTTGCA GGTGACATTT CATCGTGCAT TTGATGCCTT GGCTGAACCA
GCGCAAGCCA TTGACACCCT TATTGAGCTA GGCGTGCAAC GTATTCTCAC CTCAGGTTGT
GACTGGGGGA GTCACGATAC TGCGCAGCAG CATAGCGCAC AAATAGCACA TTACTTGGCC
CTAGCTAAGG GACAAATTGA GATAGTGATT GGCGGTGGTA TTGCTCCCGT AAGCGCTAAA
TTAATAGCGC AGTCTATAGG CCAGCAGATG GAGCAACATT ATCATTATTC TTTTCACGCT
TATTCGTCTG CTCTTATCGA CGGGGTGGTA CATGAAGACC CTGTTCTACA GTTATATCAA
GGCGTTAATG ACACTTAG
|
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| Protein sequence | MIDIEICLPC DDLAHVAQQI RAAHRGKAAR VELCSHMEHQ GLTPSMNAMQ QARAAAQGEL
ILLAMIRPRG GDFCYDEGEI LQMQHDIALA AQAGMQGVVL GALTPDNKLD QGALTRLIAV
ANNANLQVTF HRAFDALAEP AQAIDTLIEL GVQRILTSGC DWGSHDTAQQ HSAQIAHYLA
LAKGQIEIVI GGGIAPVSAK LIAQSIGQQM EQHYHYSFHA YSSALIDGVV HEDPVLQLYQ
GVNDT
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