| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0121 |
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| Symbol | |
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| ID | 4171803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 140937 |
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| End bp | 141944 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053120 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_659707 |
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| Protein GI | 109896452 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0425024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATA TTAAAAAAGT AAGTGAGCTT GCAGGCGTAT CAACCGCAAC AGTATCACGC
ACACTTAAAA TGCCAGATAT GGTCACCGCT CGAACCAAAG AAAAGGTGAT GAAAGCCGTT
CGTGAAGCGG GTTATAGGCC AAGCTGGTTA GCGACCAGTG TTAAAACTGG GCGCACAAAT
ACTATCGTTG TTTTAGTTCC TAATCTGATA AACCCCTTCT TTATGCGCAT CATTGGCGGC
ATTGAGCAGG CCGCCCAAGA ACGTGGTTTT ACAGTGTTAC TGTGCGATAC CCAAGGGGAG
AGTAAGCGCG AAAGTGATTA TGCTTCTATG GTATTGACCA ATAGGGCTGA TGGCTTAATT
CAACTCGATC ATTCATTTCC CTTTACTGAA GATGATGCCA AATTAGCTGA AACTATTCCT
ATGGTCAGTG TTTGTGAACG TATTCACTCT GATAAAAAAT ACCCAGTCGT GGCGCTTGAT
AACTATGCCG CTAGCCGCGC CTTAGCCCAT CACTTAGTCA GTTATGGACA TACCAAGTTC
GCTGTTATTG TGGGCCAAGT GGTTAGCCAA ATTCATAAAG ATCGTCTCTA CGGGCTGCGC
AGTGTCTTAG CGGAAGAGGA TATTGAGTTT GACGAAGACA TGATAGTTGG GCAAAGCTAT
AGCATTGAAA ATGGCATAGA AGGTATGCGC CAATTATTAG AAAAACCTAA TCGACCCAGC
GCGGTTATCT GCTTTAACGA TGATATAGCG ATTGGTGCCA TGCACGAAAT TCATCGCCAA
GGACTACGAG TACCAGAAGA TATTTCCGTG GTGGGATTTG ATAACGTAAA AGTGGCTGCT
TTTATGAATC CCCCGTTAAC AACTATTGAT CAACCCGCTT ATGAAATGGG TCGCAGAGGA
ATGGAGATCC TCAGTGATGT AATTAATGGG GTTCCGTTGA CTCGCAGTAG CGAAATGCTT
CCTTTTCAAC TGCTTGAGCG TGAAAGTAGC GGCCCCGCTC CTATCTAA
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| Protein sequence | MTNIKKVSEL AGVSTATVSR TLKMPDMVTA RTKEKVMKAV REAGYRPSWL ATSVKTGRTN
TIVVLVPNLI NPFFMRIIGG IEQAAQERGF TVLLCDTQGE SKRESDYASM VLTNRADGLI
QLDHSFPFTE DDAKLAETIP MVSVCERIHS DKKYPVVALD NYAASRALAH HLVSYGHTKF
AVIVGQVVSQ IHKDRLYGLR SVLAEEDIEF DEDMIVGQSY SIENGIEGMR QLLEKPNRPS
AVICFNDDIA IGAMHEIHRQ GLRVPEDISV VGFDNVKVAA FMNPPLTTID QPAYEMGRRG
MEILSDVING VPLTRSSEML PFQLLERESS GPAPI
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