| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0119 |
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| Symbol | |
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| ID | 4171801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 136932 |
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| End bp | 138209 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053118 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_659705 |
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| Protein GI | 109896450 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAC CGATTTCTCA ATCATCCGTA ACCTTAAGTG AGCCCGCGAA GAACAGTCAC
TTTGCCTTCG CAGCAATGAC CACCTTGTTT TTCATTTGGG GGTTTATTAC TGCATTAAAC
GATATTCTTA TTCCGCATTT AAAAGCGGCT TTCGACTTGA ACTATACCCA AGCCATGCTG
GTTCAGTTTT GCTTCTTTGG GGCCTACTTC ATCATCTCGC CTTTCGCTGG TAAGTTAATT
GAAAAGATAG GGTATATTCG CGGCATCATT ACCGGGTTGG TGACCATCGC CATAGGTTGT
GGCATGTTCT ATCCAGCGGC CGAAGTCGAA GTGTATGCAG TGTTTTTACT CGGTTTGTTT
ATTCTCGCCA GTGGAGTAAC CATTTTGCAG GTGTCGGCCA ATCCTTATGT CGCGGTGTTA
GGTCCAGAGA AAACCGCCAC CAGCCGCTTA AGCCTGGCAC AGGCGATTAA CTCTGTTGGT
CATACGCTTG GCCCTATGTT TGGTGCTGCA TTGATTTTTG CCGCAGTTGG GGTGGCATCT
GAAGACGCAG ACATCGACGC CAAAGCAGTA CAATTACCCT ACTTGTTACT CGCAGGCGTA
ATGATCGCCA CAGCTATTGG TTTCAAATTT TTAAAACTAC CCACCATCAC TGCCAATGAA
ACCGAACAAG AAGTGAAAAG CACGGATTCT ATTTGGTCTC ACAAAGCGTT AATTTTCGGT
ACCCTCGCGA TCTTCTCCTA CGTGGGGGCT GAGGTAAGCA TCGGTAGTTT CTTGGTAAAC
TACTTTTCGC AACCTGAAAT AGCTGGGCTA AACGAACGCC AAGCCAGCCA AATGGTCTCC
TACTACTGGG GTGCAGCTAT GATCGGGCGG TTCGTTGGTG CGGCGCTAAC CCGCATTATT
TCGCCTATCT ACGTATTGGC GTTTAATTCA GCAGTAGCCA TTATCTTGTT ATTTACCACC
ATGAATTCTC AAGGCGATTT GGCCATGTGG AGTGTGATTT CAATCGGTTT CTTCAATTCA
ATTATGTTTC CCACCATATT CACCTTGGCC ATTCGCGGCT TAGGCCCACT GACAGGACGT
GGCTCAGGTT TACTGTGCCA AGCTATTGTT GGTGGCGCAA TATTGCCCTT GATTCAAGGT
TACGTGGCCG ACGTTACGAG TGTTCAGTTT AGCTTTATCG TGCCAGTTGC TGCGTATGTC
TATATTGCAT GGTACGCCCT ATTTGGCTCT AAAGTGAAAA GTGCTGACGC CCCTACGCCA
GCGCCTGTAG CCAGCTAG
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| Protein sequence | MAGPISQSSV TLSEPAKNSH FAFAAMTTLF FIWGFITALN DILIPHLKAA FDLNYTQAML
VQFCFFGAYF IISPFAGKLI EKIGYIRGII TGLVTIAIGC GMFYPAAEVE VYAVFLLGLF
ILASGVTILQ VSANPYVAVL GPEKTATSRL SLAQAINSVG HTLGPMFGAA LIFAAVGVAS
EDADIDAKAV QLPYLLLAGV MIATAIGFKF LKLPTITANE TEQEVKSTDS IWSHKALIFG
TLAIFSYVGA EVSIGSFLVN YFSQPEIAGL NERQASQMVS YYWGAAMIGR FVGAALTRII
SPIYVLAFNS AVAIILLFTT MNSQGDLAMW SVISIGFFNS IMFPTIFTLA IRGLGPLTGR
GSGLLCQAIV GGAILPLIQG YVADVTSVQF SFIVPVAAYV YIAWYALFGS KVKSADAPTP
APVAS
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