| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0117 |
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| Symbol | |
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| ID | 4171799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 133424 |
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| End bp | 135652 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053116 |
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| Product | putative alpha-1,2-mannosidase |
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| Protein accession | YP_659703 |
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| Protein GI | 109896448 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.973431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC AGATATTCAT TACCGGCGCT GTGTTGGCGT TATGCGCATG TACGCAGCCG
ACTCCAGACG CCACCGTAAA CACGCCTCAG GCAATTGATC CCTTAGATTA TGTGGATCCG
TTTATCGGCA CTGACGGCAA AGGCAAAACC TATCCCGGTG CTACCGTGCC TTACGGCATG
GTGCAACTAA GCCCAGATAA TGGGCGCACG GGCTGGGATT GGATTTCAGG TTATTTTTAT
CCCGATAACA TCATTGCTGG TTTTAGTCAT ACCCATTTAT CTGGCACGGG GGCCGGTGAT
TTGTATGACA TTTCATTCAT GCCTTTAACC CGACCTTTTC ATCGAGAAAA AACCGAAGGT
GGCCCTGAGA ATGGCACCAT TGTCTCTCGT TTTAGCCATC AAAATGAGCA AGCATCACCT
GGGTATTATC AGGTGTTTTT AGATGATTAC GGGGTGAATG TAGAGCTAAC CGCAGGGCTT
CGCACCGGTT TTCAGAAATA CCAGTTTGCT GATGATGCAA CCCAGGGCGT GGTACGCGTA
GACTTAGGCT ACAGTCGAAA TTGGGATAAA ACCCTAGAGA CTCACATTCA AATTATCAAT
GATAAGACCA TCGCTGGTTA CCGCAAATCC ACTGGCTGGG CTAGCGATCA GCGCGTGTTC
TTTTACAGTC AGTTTTCACA GCCGATTGAT CGCTACACCT TGAACACAAA CGGAGTGACA
AGCCAAGAGC AATCAGCCTC TGGTGAAAAT ATAGCGGCGG AGTTCGATTT TGATTTCTCT
GAGGTCAGCA GCCAAAAGCT TGTTACTGTG CGCACCGCTA TTAGCTCAGT CAGCATAGAG
AACGCCAAGC AAAACCTGCT TGCCCAAGGA CCAGTTAAAA CCTTTGAACA AGTAAAAACG
CTTGCCCAGC AAGCATGGCG AGAGCAACTT AGCACAGTAG AAATAAGCGC TGACAAAGAT
GACATGATCC AGTTTTATAC GGCCATGTAT CACACTGCGT TAGCACCTCG GGTGTTTTCC
GACAGTAACG GGGAATATAA AGGCCCTGAC GGCGAAGTTC ATAAAAGTGA ACGCTACCCT
AGATACGAGT TCTTCTCTTT GTGGGACACA TTTCGTGCCT TACACCCATG GAAAACCATT
GTTGAACCCA CTCGCACCCG AGCGCTCATG GCTTCGATCA TGGCGCATTA CGATGTGGCA
GGTCGCCTAC CCGTTTGGAA CTTTCAAGGC AATGAAACAG ACATGATGAT GGGTTACCAC
AGTGTCCCTG TGCTTATCGA TGCCTATTTC AAAGACCTGC TAGACGCCAG CGGGGAAGAA
GTACTGGCAG CAGCTATACA AAGCGCCACT CAAAATGAGT TCGGTTTAGA GAGTTATCAA
GCATTAGGCT ATGTGCCCTT TGAAGAACGT AGTTGGAACG TATCGCTAAC CTTGGAATAT
GCCTTTGATG ATTGGGCGAT TGCTCAGTTG GCCAGTTCCT TAGGTGAAAA TGAGGTGTAT
CAAACGTACC AATCACGAGG GCAAAACTAT CGTAACCTAT TCGACCCACT AAGCGAGTTT
ATGCGTGCCA AAAGCGTAAA TGGTGATTTT CGCAGCGATT TCGACCCGAA TGCCTACCAT
CCAGAGGACT ACTGCGAGGC CAACGCTTGG CAATACAGCT TCTTTGTGCC ACAAGATGTC
ACTGGGTTAA TCGATATAAT GGGCGGTGCG GCGCCGTTTG AAGCTCAACT GGATGCGATG
TTCGAAGCCG AGCAAACCGT GGGCGAGTTC CCCGAGTGGA TTTCAGGCTA CATAGGTCAG
TATGTGCATG GCAACGAGCC AAGCCACCAT GTGCCTTACC TCTATCAATA CGTTGGCAAG
GGTTACAAAA CACAAAAATA CGTACGCCAA GTGATGGACG AGCTTTATCA TACCGCCCCG
GATGGCTTGT CGGGCAATGA AGATGCAGGC CAAATGTCGG CGTGGTACCT ATTCAGCGCA
TTAGGCTTTT ATCCCGTTAA TCCGGTATCA GGGGAATATG TGTTAGGTAG CCCAGAAGTT
TCTTCTGCCA AGATTCATTT AGAAAACGGC AAAACCTTTA GCGTGCAAGC GCTCAATCAA
TCGAAAGAGA ACGTGTATGT TCAAAGCGTG AGCCTAAATG GTCAGCCTTT GCAGCAATTC
TTTATCCGTC ACAGTGATAT ATTAGCCGGC GGAAATTTGG TATTTGAAAT GGGAGCCCAG
CCAAAATGA
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| Protein sequence | MMKQIFITGA VLALCACTQP TPDATVNTPQ AIDPLDYVDP FIGTDGKGKT YPGATVPYGM
VQLSPDNGRT GWDWISGYFY PDNIIAGFSH THLSGTGAGD LYDISFMPLT RPFHREKTEG
GPENGTIVSR FSHQNEQASP GYYQVFLDDY GVNVELTAGL RTGFQKYQFA DDATQGVVRV
DLGYSRNWDK TLETHIQIIN DKTIAGYRKS TGWASDQRVF FYSQFSQPID RYTLNTNGVT
SQEQSASGEN IAAEFDFDFS EVSSQKLVTV RTAISSVSIE NAKQNLLAQG PVKTFEQVKT
LAQQAWREQL STVEISADKD DMIQFYTAMY HTALAPRVFS DSNGEYKGPD GEVHKSERYP
RYEFFSLWDT FRALHPWKTI VEPTRTRALM ASIMAHYDVA GRLPVWNFQG NETDMMMGYH
SVPVLIDAYF KDLLDASGEE VLAAAIQSAT QNEFGLESYQ ALGYVPFEER SWNVSLTLEY
AFDDWAIAQL ASSLGENEVY QTYQSRGQNY RNLFDPLSEF MRAKSVNGDF RSDFDPNAYH
PEDYCEANAW QYSFFVPQDV TGLIDIMGGA APFEAQLDAM FEAEQTVGEF PEWISGYIGQ
YVHGNEPSHH VPYLYQYVGK GYKTQKYVRQ VMDELYHTAP DGLSGNEDAG QMSAWYLFSA
LGFYPVNPVS GEYVLGSPEV SSAKIHLENG KTFSVQALNQ SKENVYVQSV SLNGQPLQQF
FIRHSDILAG GNLVFEMGAQ PK
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