| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0115 |
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| Symbol | |
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| ID | 4171797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 129932 |
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| End bp | 131038 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053114 |
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| Product | hypothetical protein |
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| Protein accession | YP_659701 |
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| Protein GI | 109896446 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2855] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGGG CAGTTAAGCG TTTTTTCATT ACGGGGCAAG ATGGTACCTC AAGCACACGC
CATCATTATG GCGATTCACG CTGGTGGTTA GGTTTAGTCT TAGTAACAAG CATCGCGTTT
ATCGCCACTT ATCTGAGTCA TGTTTCCTTT GTCCAACATC TTGGATTGAG CGCACTAACC
ATAGGTATTG TGTTGGGGAT TATTGTTGGC AACACGCTAT TTTCGCGTAT GGCCACGCAC
ACTGATGTAG GCGTAGATTA CGCCAAGAGT ACCTTATTAA AAGCCGGTGT GGTGTTATTT
GGTTTTCGCA TTACCTTCGC ACAAGTGGCG GGAGTCGGCT GGCAAGGGTT AATTACTGAC
ATCGCCATAT TGAGCTTAAC TTTTTGGCTG GCAGTGCAAC TTGGTAAGCG TGTATTTAAG
TTAGACGAGC AAACCACCAT TTTGATTGGT GCCGGTAGCG CTATTTGTGG TGCAGCGGCG
GTGATGGCTA CAGAGCCTGT GGTAAAAGCT CAAGCGCACA AGGTTTCCGT CGCAGTCGCT
ACCGTGGTGG TGTTTGGCAC CTTGAGCATG TTTGTTTATC CCATTGCCCA AGGTTACTTA
GGCCTCAGTG AGCATGCATA CGGTATTTTC GCTGGTTCAA CGATTCACGA AGTGGCGCAA
GTCGTGGCGG CAGGCAGTGC TGTTAGCCCT GAAGCCGCTA ACGCGGCGGT GATTGAGAAA
ATGCTCAGGG TGATGATGCT TGCCCCGTTT TTAGTGCTGT TATCGCTGTG GCAAAGCAAC
AAGCGCGCTA CGGGCAAAGT GGTCGACGGA GCTAGCTCAC AGGGCGACAG TGGTAAAAGC
AACATCATGA TCCCCTGGTT TGCCCTACTA TTTATTGTTG CCAGTGGGAT TAATTCTAGC
CAGTTGGTTT CACCTGATAT TACCGAGCAA GTTGTGCATT TAGACGGCGT GTTACTTACC
ATTGCCATGG TGGCGTTAGG GCTGCGAACG CACATAGGCG CAATCCGCCA AGCTGGCGTA
AAACCCTTGC TACTAGCAAG CTGTTTGTTT TTGTTCTTAA CCCTAGGCGG ATATGGGCTG
AATTTAGTGA TAGCTCAGTG GTTATAA
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| Protein sequence | MFGAVKRFFI TGQDGTSSTR HHYGDSRWWL GLVLVTSIAF IATYLSHVSF VQHLGLSALT
IGIVLGIIVG NTLFSRMATH TDVGVDYAKS TLLKAGVVLF GFRITFAQVA GVGWQGLITD
IAILSLTFWL AVQLGKRVFK LDEQTTILIG AGSAICGAAA VMATEPVVKA QAHKVSVAVA
TVVVFGTLSM FVYPIAQGYL GLSEHAYGIF AGSTIHEVAQ VVAAGSAVSP EAANAAVIEK
MLRVMMLAPF LVLLSLWQSN KRATGKVVDG ASSQGDSGKS NIMIPWFALL FIVASGINSS
QLVSPDITEQ VVHLDGVLLT IAMVALGLRT HIGAIRQAGV KPLLLASCLF LFLTLGGYGL
NLVIAQWL
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