| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0107 |
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| Symbol | |
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| ID | 4171789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 123037 |
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| End bp | 123513 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053106 |
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| Product | transcription elongation factor GreB |
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| Protein accession | YP_659693 |
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| Protein GI | 109896438 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00180134 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAACAA AACTCATTAC CCCTGAAGGC TACAAAAAAC TCAACGACGA GCATGATGAA
CTGTGGCTAA AACAACGCCC AGAGATCACT AAAATCGTCA CATGGGCAGC CAGCTTGGGT
GACAGAAGTG AAAATGCGGA TTACCAATAC AACAAGCGAA AGTTGCGAGA AATCGACAGA
CGCGTTCGCT ACCTACGCAA GCTCCTGCCT GAACTACAAA TCGTTAATTA CTCCCCTCAG
CAAGCGGGTA AAGTATTCTT TGGTGCCTGG GTAGAGATTG AAAACGATGA AGGCGAAACA
AAGCAATTTC GCATTGTCGG CCCAGAAGAA ATCTACGGCG ATGCTAAAGG CTACATTTCT
ATCGACTCCC CCATGGCCAG AGCGTTAATC AAGAAAGAAG TAGATGATGT CGCCAGTGTC
AAAACCCCCA CCGGCTACAA AGACTGGTAC GTCACCTCGA TTGAATATAA AAAATAG
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| Protein sequence | MKTKLITPEG YKKLNDEHDE LWLKQRPEIT KIVTWAASLG DRSENADYQY NKRKLREIDR
RVRYLRKLLP ELQIVNYSPQ QAGKVFFGAW VEIENDEGET KQFRIVGPEE IYGDAKGYIS
IDSPMARALI KKEVDDVASV KTPTGYKDWY VTSIEYKK
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