Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0100 |
Symbol | |
ID | 4172872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 114100 |
End bp | 114525 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053099 |
Product | MarR family transcriptional regulator |
Protein accession | YP_659686 |
Protein GI | 109896431 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTG AAAACTTACA GTTAAAAAAT CAGCTATGTC ATCGCTTGTA CATGGCTTCC AATAATATCG CCCGTGCCTA TCGCGAGCCT TTACTTGCAC TGAATCTGAC CTACCCGCAA TATGTGGTGA TGATGGCGTT ATGGGAAAAG GACGGGATCA CCATCGCCCA ACTCATCGAG CAAACCGCTA TCGATGGTGG CGCGATGACG CAAATTTTGA AAAAGATGGC AGACAAAGAG CTGCTTAACA TCATTAAAGA CGAGCAAGAC AAACGAAAAC GGGTAATAAA GCTCAGTGAC TCAGGCCAAG CGTTAAAGCT TAAAGCCACT GACGTCCCCG ACAAAGTATT GTGTCAATTT GCAGCGATTA CCCCAGCACA AAGTAAACAG CTAATGGATT TGCTTGATTT GGTTGTGGCC GTTTAA
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Protein sequence | MSFENLQLKN QLCHRLYMAS NNIARAYREP LLALNLTYPQ YVVMMALWEK DGITIAQLIE QTAIDGGAMT QILKKMADKE LLNIIKDEQD KRKRVIKLSD SGQALKLKAT DVPDKVLCQF AAITPAQSKQ LMDLLDLVVA V
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