| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0082 |
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| Symbol | |
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| ID | 4171783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 96793 |
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| End bp | 97500 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638053081 |
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| Product | two-component response regulator |
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| Protein accession | YP_659668 |
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| Protein GI | 109896413 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGACGC CCAATATTTT GATTGTAGAA GATGAAGTTG TTACTAGAAC AACCCTCAAG
AGCCTGTTTG AAGCAGAAGG CTATAATGTG TTTGAAGCCG AAAACGGTAG CGAAATGCAT
GAGTTTTTTG AAAATCACGC AATAAATTTA GTGATCATGG ACATTAACTT ACCGGGTAAA
AATGGTTTGA TTTTGGCCCG TGAAGTACGT GATCGTAAAA ATATCGGTCT AATCTTTTTA
ACCGGTCGCG ATAACGATGT TGACCGTATA TTAGGTCTTG AAATCGGCGC AGACGATTAT
TTAACTAAAC CGTTTAATCC GCGTGAGTTG ACCATTAGAG CCAGAAACTT ATTAACGCGT
ACATTGAACA ACGCAGAAGA CGACGACTTG CCAAGTCGAG TTAGCTTTAA CGGTTGGACA
CTAGATGGCG ACAGCCGTAG TTTGATTTCT CCTAGTAAGA AGGAATTCAG ACTACCACGC
AGTGAATTCC GTGCGTTGCA TTTATTCTTA AGCAACCCGG GCAAAATTTT AACTCGTGAA
CAGCTGATTA TGGAAATGAC AGGTCGTGAA TTACGCCCGA ATGACCGTAC TGTTGATGTC
ACCATTCGCC GTATCCGTAA GCACTTCGAA TCAGAAGTAA ATGCTGACGA ATTGATCGTG
ACTATTCACG GTGAAGGTTA CCGTTTCTGC GGTACCGTTG ACGTATAA
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| Protein sequence | MLTPNILIVE DEVVTRTTLK SLFEAEGYNV FEAENGSEMH EFFENHAINL VIMDINLPGK
NGLILAREVR DRKNIGLIFL TGRDNDVDRI LGLEIGADDY LTKPFNPREL TIRARNLLTR
TLNNAEDDDL PSRVSFNGWT LDGDSRSLIS PSKKEFRLPR SEFRALHLFL SNPGKILTRE
QLIMEMTGRE LRPNDRTVDV TIRRIRKHFE SEVNADELIV TIHGEGYRFC GTVDV
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